PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TP Query FPFP gt% FP ma
51051-51100 / 86044 show all
jmaeng-gatkINDELI16_PLUSmap_l100_m2_e1hetalt
80.0000
66.6667
100.0000
94.4444
21200
jmaeng-gatkINDELI16_PLUSmap_l125_m0_e0homalt
100.0000
100.0000
100.0000
98.4252
20200
jmaeng-gatkINDELI16_PLUSmap_l125_m1_e0hetalt
80.0000
66.6667
100.0000
91.3043
21200
jmaeng-gatkINDELI16_PLUSmap_l125_m2_e0hetalt
80.0000
66.6667
100.0000
92.0000
21200
jmaeng-gatkINDELI16_PLUSmap_l125_m2_e1hetalt
80.0000
66.6667
100.0000
92.0000
21200
jmaeng-gatkINDELI16_PLUSmap_l150_m0_e0het
80.0000
100.0000
66.6667
98.1707
20210
0.0000
jmaeng-gatkINDELI16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
71.4286
20200
jmaeng-gatkINDELI16_PLUStech_badpromotershomalt
100.0000
100.0000
100.0000
66.6667
20200
jmaeng-gatkINDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
0.0000
20200
jmaeng-gatkINDELI1_5lowcmp_SimpleRepeat_triTR_51to200het
80.0000
100.0000
66.6667
90.9091
20210
0.0000
jmaeng-gatkINDELI1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
98.0392
20200
jmaeng-gatkINDELI1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
98.4127
20200
jmaeng-gatkINDELI1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
98.4375
20200
jmaeng-gatkINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.8691
20200
jmaeng-gatkINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.3691
20200
jmaeng-gatkINDELI6_15map_l250_m1_e0het
57.1429
50.0000
66.6667
98.9437
22211
100.0000
jmaeng-gatkINDELI6_15map_l250_m1_e0homalt
80.0000
66.6667
100.0000
97.7778
21200
jmaeng-gatkINDELI6_15map_l250_m2_e0homalt
80.0000
66.6667
100.0000
97.9798
21200
jmaeng-gatkINDELI6_15map_l250_m2_e1homalt
80.0000
66.6667
100.0000
98.0583
21200
jmaeng-gatkSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.9091
20200
jmaeng-gatkSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
89.4737
20200
jmaeng-gatkSNP*lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
97.2973
20200
jmaeng-gatkSNP*map_l125_m0_e0hetalt
36.3636
22.2222
100.0000
98.3051
27200
jmaeng-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
93.3333
20200
jmaeng-gatkSNPtilowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
77.7778
20200
jmaeng-gatkSNPtilowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
96.7742
20200
jmaeng-gatkSNPtimap_l125_m0_e0hetalt
40.0000
25.0000
100.0000
97.2973
26200
ltrigg-rtg1INDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
100.0000
97.8723
00200
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
66.6667
97.2222
00211
100.0000
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
0.0000
100.0000
97.2222
00200
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
0.0000
100.0000
91.6667
00200
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50homalt
0.0000
0.0000
100.0000
94.8718
00200
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
100.0000
95.3488
00200
ltrigg-rtg1INDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
0.0000
0.0000
66.6667
96.5116
00210
0.0000
ltrigg-rtg1INDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
100.0000
94.8718
00200
ltrigg-rtg1INDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
100.0000
95.0000
00200
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_diTR_51to200*
0.0000
0.0000
100.0000
97.5000
00200
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_quadTR_51to200het
0.0000
0.0000
100.0000
94.7368
00200
ltrigg-rtg1INDELC1_5map_l100_m0_e0hetalt
0.0000
0.0000
100.0000
96.1538
00200
ltrigg-rtg1INDELC1_5map_l125_m0_e0homalt
0.0000
0.0000
100.0000
97.8723
00200
ltrigg-rtg1INDELC1_5map_l125_m1_e0hetalt
0.0000
0.0000
100.0000
97.5000
00200
ltrigg-rtg1INDELC1_5map_l125_m2_e0hetalt
0.0000
0.0000
100.0000
97.8723
00200
ltrigg-rtg1INDELC1_5map_l125_m2_e1hetalt
0.0000
0.0000
100.0000
97.8947
00200
ltrigg-rtg1INDELC1_5map_l150_m0_e0homalt
0.0000
0.0000
100.0000
97.2973
00200
ltrigg-rtg1INDELC1_5map_l150_m1_e0het
0.0000
0.0000
100.0000
98.7500
00200
ltrigg-rtg1INDELC1_5map_l150_m2_e0het
0.0000
0.0000
100.0000
98.9362
00200
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
100.0000
85.7143
00200
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
100.0000
96.8254
00200
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
100.0000
97.2603
00200
ltrigg-rtg1INDELC6_15lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.6364
10200