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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1016 1017 1018 1019 1020 1021 1022 1023 1024 ... 1720 1721 » 50951-51000 / 86044 show all
ckim-gatk	SNP	ti	segdup	hetalt	100.0000	100.0000	100.0000	99.2453	2	0	2	0	0
ckim-gatk	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	90.9091	2	0	2	0	0
ckim-gatk	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	89.4737	2	0	2	0	0
ckim-gatk	SNP	tv	map_l125_m0_e0	hetalt	36.3636	22.2222	100.0000	97.9167	2	7	2	0	0
ckim-isaac	INDEL	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt	57.1429	40.0000	100.0000	99.5000	2	3	2	0	0
ckim-isaac	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt	66.6667	50.0000	100.0000	99.4949	2	2	2	0	0
ckim-isaac	INDEL	*	map_l250_m1_e0	hetalt	80.0000	66.6667	100.0000	98.6667	4	2	2	0	0
ckim-isaac	INDEL	*	map_l250_m2_e0	hetalt	80.0000	66.6667	100.0000	98.9011	4	2	2	0	0
ckim-isaac	INDEL	*	map_l250_m2_e1	hetalt	80.0000	66.6667	100.0000	98.9529	4	2	2	0	0
ciseli-custom	INDEL	I6_15	tech_badpromoters	*	25.0000	15.3846	66.6667	57.1429	2	11	2	1	1	100.0000
ciseli-custom	INDEL	I6_15	tech_badpromoters	het	44.4444	28.5714	100.0000	60.0000	2	5	2	0	0
ciseli-custom	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	40.0000	66.6667	28.5714	89.7059	2	1	2	5	0	0.0000
ciseli-custom	SNP	*	map_l250_m1_e0	hetalt	50.0000	50.0000	50.0000	90.4762	2	2	2	2	2	100.0000
ciseli-custom	SNP	ti	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	100.0000	100.0000	100.0000	77.7778	2	0	2	0	0
ciseli-custom	SNP	ti	map_l250_m1_e0	hetalt	50.0000	50.0000	50.0000	82.6087	2	2	2	2	2	100.0000
ciseli-custom	SNP	ti	segdup	hetalt	80.0000	100.0000	66.6667	96.5909	2	0	2	1	0	0.0000
ciseli-custom	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	40.0000	66.6667	28.5714	89.7059	2	1	2	5	0	0.0000
ciseli-custom	SNP	tv	map_l250_m1_e0	hetalt	50.0000	50.0000	50.0000	90.4762	2	2	2	2	2	100.0000
ckim-dragen	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het	100.0000	100.0000	100.0000	98.0198	2	0	2	0	0
ckim-dragen	INDEL	C6_15	*	*	80.0000	100.0000	66.6667	88.4615	7	0	2	1	1	100.0000
ckim-dragen	INDEL	C6_15	*	hetalt	0.0000	0.0000	66.6667	88.4615	0	0	2	1	1	100.0000
ckim-dragen	INDEL	C6_15	HG002complexvar	*	80.0000	100.0000	66.6667	78.5714	4	0	2	1	1	100.0000
ckim-dragen	INDEL	C6_15	HG002complexvar	hetalt	0.0000	0.0000	66.6667	78.5714	0	0	2	1	1	100.0000
ckim-dragen	INDEL	C6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	80.0000	100.0000	66.6667	87.5000	1	0	2	1	1	100.0000
ckim-dragen	INDEL	C6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	0.0000	0.0000	66.6667	87.5000	0	0	2	1	1	100.0000
ckim-dragen	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	0.0000	0.0000	66.6667	86.3636	0	0	2	1	1	100.0000
ckim-dragen	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	0.0000	0.0000	66.6667	86.3636	0	0	2	1	1	100.0000
ckim-dragen	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	0.0000	0.0000	66.6667	86.3636	0	0	2	1	1	100.0000
ckim-dragen	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	0.0000	0.0000	66.6667	86.3636	0	0	2	1	1	100.0000
ckim-dragen	INDEL	D16_PLUS	decoy	homalt	100.0000	100.0000	100.0000	99.2674	2	0	2	0	0
cchapple-custom	INDEL	I6_15	map_l150_m0_e0	het	57.1429	50.0000	66.6667	98.0645	2	2	2	1	0	0.0000
cchapple-custom	INDEL	I6_15	map_l250_m1_e0	het	57.1429	50.0000	66.6667	98.4615	2	2	2	1	0	0.0000
ciseli-custom	INDEL	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt	30.7692	40.0000	25.0000	99.2747	2	3	2	6	3	50.0000
ciseli-custom	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt	40.0000	50.0000	33.3333	99.4197	2	2	2	4	2	50.0000
ciseli-custom	INDEL	C16_PLUS	*	het	0.0000	0.0000	22.2222	96.6543	0	0	2	7	0	0.0000
ciseli-custom	INDEL	C16_PLUS	HG002complexvar	het	0.0000	0.0000	28.5714	91.1392	0	0	2	5	0	0.0000
ciseli-custom	INDEL	C16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	0.0000	0.0000	25.0000	97.8261	0	0	2	6	0	0.0000
ciseli-custom	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	0.0000	0.0000	33.3333	97.6562	0	0	2	4	0	0.0000
ciseli-custom	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	0.0000	0.0000	40.0000	97.6636	0	0	2	3	0	0.0000
ciseli-custom	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	0.0000	0.0000	15.3846	93.4343	0	0	2	11	3	27.2727
ltrigg-rtg1	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_51to200	homalt	100.0000	100.0000	100.0000	96.9231	1	0	2	0	0
ltrigg-rtg1	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_51to200	het	80.0000	100.0000	66.6667	88.8889	2	0	2	1	0	0.0000
ltrigg-rtg1	INDEL	I1_5	map_l250_m1_e0	hetalt	100.0000	100.0000	100.0000	98.8235	2	0	2	0	0
ltrigg-rtg1	INDEL	I1_5	map_l250_m2_e0	hetalt	100.0000	100.0000	100.0000	99.0385	2	0	2	0	0
ltrigg-rtg1	INDEL	I1_5	map_l250_m2_e1	hetalt	100.0000	100.0000	100.0000	99.0521	2	0	2	0	0
ltrigg-rtg1	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_gt10	*	100.0000	100.0000	100.0000	99.8429	2	0	2	0	0
ltrigg-rtg1	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt	100.0000	100.0000	100.0000	99.6330	2	0	2	0	0
ltrigg-rtg1	INDEL	I6_15	map_l150_m0_e0	het	66.6667	50.0000	100.0000	94.2857	2	2	2	0	0
ltrigg-rtg1	INDEL	I6_15	map_l250_m1_e0	het	66.6667	50.0000	100.0000	95.8333	2	2	2	0	0
ltrigg-rtg1	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	75.0000	1	0	2	0	0

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