PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TP Query FPFP gt% FP ma
50801-50850 / 86044 show all
cchapple-customINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.3976
10200
cchapple-customINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
66.6667
50.0000
100.0000
99.4911
22200
cchapple-customINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.3846
10200
cchapple-customINDELD16_PLUSmap_l125_m0_e0homalt
100.0000
100.0000
100.0000
96.0000
20200
cchapple-customINDELD1_5decoyhet
100.0000
100.0000
100.0000
99.9733
20200
cchapple-customINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.3174
20200
cchapple-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.3007
20200
cchapple-customINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
88.8889
20200
cchapple-customINDELD6_15map_l250_m0_e0homalt
100.0000
100.0000
100.0000
96.7742
20200
cchapple-customINDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
87.5000
20200
cchapple-customINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200*
57.1429
50.0000
66.6667
91.1765
22210
0.0000
cchapple-customINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200het
66.6667
50.0000
100.0000
93.5484
11200
cchapple-customINDELI16_PLUSmap_l100_m0_e0homalt
100.0000
100.0000
100.0000
98.2759
20200
cchapple-customINDELI16_PLUSmap_l125_m0_e0homalt
100.0000
100.0000
100.0000
98.0769
20200
cchapple-customINDELI16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
71.4286
20200
cchapple-customINDELI16_PLUStech_badpromotershomalt
100.0000
100.0000
100.0000
71.4286
20200
ckim-dragenINDELD16_PLUSmap_l125_m0_e0homalt
100.0000
100.0000
100.0000
98.5612
20200
ckim-dragenINDELD16_PLUSmap_l125_m1_e0hetalt
80.0000
66.6667
100.0000
94.2857
21200
ckim-dragenINDELD16_PLUSmap_l125_m2_e0hetalt
80.0000
66.6667
100.0000
94.5946
21200
ckim-dragenINDELD16_PLUSmap_l125_m2_e1hetalt
66.6667
50.0000
100.0000
94.7368
22200
ckim-dragenINDELD16_PLUSmap_l250_m1_e0*
44.4444
50.0000
40.0000
98.5549
22231
33.3333
ckim-dragenINDELD16_PLUSmap_l250_m1_e0het
50.0000
66.6667
40.0000
98.0989
21231
33.3333
ckim-dragenINDELD16_PLUSmap_l250_m2_e0het
50.0000
66.6667
40.0000
98.3607
21231
33.3333
ckim-dragenINDELD16_PLUSmap_l250_m2_e1het
50.0000
66.6667
40.0000
98.3819
21231
33.3333
ckim-dragenINDELD1_5decoyhet
100.0000
100.0000
100.0000
99.9833
20200
ckim-dragenINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.3031
20200
ckim-dragenINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.2727
20200
ckim-dragenINDELD1_5map_l125_m0_e0hetalt
80.0000
66.6667
100.0000
98.1818
21200
ckim-dragenINDELD1_5map_l250_m1_e0hetalt
80.0000
66.6667
100.0000
98.1308
21200
ckim-dragenINDELD1_5map_l250_m2_e0hetalt
80.0000
66.6667
100.0000
98.4496
21200
ckim-dragenINDELD1_5map_l250_m2_e1hetalt
80.0000
66.6667
100.0000
98.4962
21200
ckim-dragenINDELD1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
20200
ckim-dragenINDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
60.0000
20200
ckim-dragenINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.4762
20200
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.5185
20200
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
86.6667
20200
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
91.3043
20200
ckim-dragenINDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
88.8889
20200
ckim-dragenINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200*
66.6667
50.0000
100.0000
94.1176
22200
ckim-dragenINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
66.6667
50.0000
100.0000
75.0000
11200
ckim-dragenINDELI16_PLUSmap_l100_m0_e0homalt
80.0000
100.0000
66.6667
93.1818
20210
0.0000
ckim-dragenINDELI16_PLUSmap_l100_m1_e0hetalt
80.0000
66.6667
100.0000
92.3077
21200
ckim-dragenINDELI16_PLUSmap_l100_m2_e0hetalt
80.0000
66.6667
100.0000
93.7500
21200
ckim-dragenINDELI16_PLUSmap_l100_m2_e1hetalt
80.0000
66.6667
100.0000
93.9394
21200
ckim-dragenINDELI16_PLUSmap_l125_m0_e0homalt
80.0000
100.0000
66.6667
89.2857
20210
0.0000
ckim-dragenINDELI16_PLUSmap_l125_m1_e0hetalt
80.0000
66.6667
100.0000
88.8889
21200
ckim-dragenINDELI16_PLUSmap_l125_m2_e0hetalt
80.0000
66.6667
100.0000
91.3043
21200
ckim-dragenINDELI16_PLUSmap_l125_m2_e1hetalt
80.0000
66.6667
100.0000
91.3043
21200
ckim-dragenINDELI16_PLUSmap_l150_m0_e0het
80.0000
100.0000
66.6667
96.1039
20210
0.0000
ckim-dragenINDELI16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
71.4286
20200