PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TP Query FPFP gt% FP ma
50551-50600 / 86044 show all
ckim-isaacINDELD6_15map_l250_m1_e0homalt
57.1429
40.0000
100.0000
91.3043
23200
ckim-isaacINDELD6_15map_l250_m2_e0homalt
50.0000
33.3333
100.0000
92.5926
24200
ckim-isaacINDELD6_15map_l250_m2_e1homalt
50.0000
33.3333
100.0000
93.1034
24200
ckim-isaacINDELD6_15tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
10200
ckim-isaacINDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
71.4286
20200
ckim-isaacINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
88.8889
10200
ckim-isaacINDELI1_5lowcmp_SimpleRepeat_diTR_51to200het
87.5000
77.7778
100.0000
95.7447
216200
ckim-isaacINDELI1_5map_l150_m0_e0hetalt
80.0000
66.6667
100.0000
97.0149
21200
ckim-isaacINDELI6_15func_cdshetalt
66.6667
50.0000
100.0000
33.3333
22200
hfeng-pmm3INDELD1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
97.8261
20200
hfeng-pmm3INDELD1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
20200
hfeng-pmm3INDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
60.0000
20200
hfeng-pmm3INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.0000
20200
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.1651
20200
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
84.6154
20200
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
90.9091
20200
hfeng-pmm3INDELD6_15map_l250_m0_e0homalt
100.0000
100.0000
100.0000
96.7213
20200
hfeng-pmm3INDELD6_15map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
95.6522
20200
hfeng-pmm3INDELD6_15map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
96.4912
20200
hfeng-pmm3INDELD6_15map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
96.5517
20200
hfeng-pmm3INDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
88.8889
20200
hfeng-pmm3INDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200*
57.1429
50.0000
66.6667
89.2857
22210
0.0000
hfeng-pmm3INDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
66.6667
50.0000
100.0000
75.0000
11200
hfeng-pmm3INDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200*
66.6667
50.0000
100.0000
84.6154
22200
hfeng-pmm3INDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
100.0000
100.0000
100.0000
60.0000
20200
hfeng-pmm3INDELI16_PLUSmap_l100_m0_e0homalt
80.0000
100.0000
66.6667
97.6923
20210
0.0000
hfeng-pmm3INDELI16_PLUSmap_l100_m1_e0hetalt
80.0000
66.6667
100.0000
92.8571
21200
hfeng-pmm3INDELI16_PLUSmap_l100_m2_e0hetalt
80.0000
66.6667
100.0000
94.1176
21200
hfeng-pmm3INDELI16_PLUSmap_l100_m2_e1hetalt
80.0000
66.6667
100.0000
94.2857
21200
hfeng-pmm3INDELI16_PLUSmap_l125_m0_e0homalt
80.0000
100.0000
66.6667
97.4576
20210
0.0000
hfeng-pmm3INDELI16_PLUSmap_l125_m1_e0hetalt
80.0000
66.6667
100.0000
89.4737
21200
hfeng-pmm3INDELI16_PLUSmap_l125_m2_e0hetalt
80.0000
66.6667
100.0000
91.6667
21200
hfeng-pmm3INDELI16_PLUSmap_l125_m2_e1hetalt
80.0000
66.6667
100.0000
91.6667
21200
hfeng-pmm3INDELI16_PLUSmap_l150_m0_e0het
80.0000
100.0000
66.6667
96.5116
20210
0.0000
hfeng-pmm3INDELI16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
66.6667
20200
hfeng-pmm3INDELI16_PLUStech_badpromotershomalt
100.0000
100.0000
100.0000
66.6667
20200
hfeng-pmm3INDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
33.3333
20200
hfeng-pmm3INDELI1_5lowcmp_SimpleRepeat_diTR_51to200het
89.7959
81.4815
100.0000
98.0952
225200
hfeng-pmm3INDELI1_5lowcmp_SimpleRepeat_triTR_51to200het
80.0000
100.0000
66.6667
88.0000
20210
0.0000
hfeng-pmm3INDELI1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
97.8495
20200
hfeng-pmm3INDELI1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
98.3607
20200
hfeng-pmm3INDELI1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
98.3871
20200
hfeng-pmm3INDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.8395
20200
hfeng-pmm3INDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.3220
20200
hfeng-pmm3INDELI6_15map_l250_m1_e0het
57.1429
50.0000
66.6667
97.5806
22211
100.0000
hfeng-pmm3INDELI6_15map_l250_m1_e0homalt
80.0000
66.6667
100.0000
97.1429
21200
hfeng-pmm3INDELI6_15map_l250_m2_e0homalt
80.0000
66.6667
100.0000
97.3333
21200
hfeng-pmm3INDELI6_15map_l250_m2_e1homalt
80.0000
66.6667
100.0000
97.4684
21200
hfeng-pmm3SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
91.3043
20200
hfeng-pmm3SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.0000
20200