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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1007 1008 1009 1010 1011 1012 1013 1014 1015 ... 1720 1721 » 50501-50550 / 86044 show all
ckim-vqsr	SNP	ti	segdup	hetalt	100.0000	100.0000	100.0000	99.2453	2	0	2	0	0
ckim-vqsr	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	90.9091	2	0	2	0	0
ckim-vqsr	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	89.4737	2	0	2	0	0
ckim-vqsr	SNP	tv	map_l100_m0_e0	hetalt	22.2222	12.5000	100.0000	98.1308	2	14	2	0	0
dgrover-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het	100.0000	100.0000	100.0000	98.0000	2	0	2	0	0
dgrover-gatk	INDEL	D16_PLUS	decoy	homalt	100.0000	100.0000	100.0000	99.0148	2	0	2	0	0
dgrover-gatk	INDEL	D16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt	80.0000	100.0000	66.6667	98.5437	2	0	2	1	0	0.0000
dgrover-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt	80.0000	100.0000	66.6667	98.5294	2	0	2	1	0	0.0000
dgrover-gatk	INDEL	D16_PLUS	map_l125_m0_e0	homalt	100.0000	100.0000	100.0000	97.7011	2	0	2	0	0
dgrover-gatk	INDEL	D16_PLUS	map_l250_m1_e0	het	57.1429	66.6667	50.0000	97.7528	2	1	2	2	0	0.0000
dgrover-gatk	INDEL	D16_PLUS	map_l250_m2_e0	het	57.1429	66.6667	50.0000	98.1900	2	1	2	2	0	0.0000
dgrover-gatk	INDEL	D16_PLUS	map_l250_m2_e1	het	57.1429	66.6667	50.0000	98.2222	2	1	2	2	0	0.0000
dgrover-gatk	INDEL	D1_5	decoy	het	100.0000	100.0000	100.0000	99.9573	2	0	2	0	0
dgrover-gatk	INDEL	D1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	99.3750	2	0	2	0	0
dgrover-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	99.3548	2	0	2	0	0
dgrover-gatk	INDEL	D1_5	map_l150_m0_e0	hetalt	100.0000	100.0000	100.0000	98.0769	2	0	2	0	0
dgrover-gatk	INDEL	D1_5	tech_badpromoters	hetalt	100.0000	100.0000	100.0000	0.0000	2	0	2	0	0
dgrover-gatk	INDEL	D6_15	func_cds	hetalt	100.0000	100.0000	100.0000	60.0000	2	0	2	0	0
dgrover-gatk	INDEL	D6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	89.4737	2	0	2	0	0
dgrover-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het	100.0000	100.0000	100.0000	98.3607	2	0	2	0	0
dgrover-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	83.3333	2	0	2	0	0
dgrover-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	*	100.0000	100.0000	100.0000	92.8571	2	0	2	0	0
ckim-isaac	INDEL	D16_PLUS	HG002compoundhet	homalt	23.5294	25.0000	22.2222	66.6667	2	6	2	7	6	85.7143
ckim-isaac	INDEL	D16_PLUS	decoy	homalt	100.0000	100.0000	100.0000	96.4912	2	0	2	0	0
ckim-isaac	INDEL	D16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	66.6667	50.0000	100.0000	96.7742	2	2	2	0	0
ckim-isaac	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*	66.6667	50.0000	100.0000	96.7213	2	2	2	0	0
ckim-isaac	INDEL	D16_PLUS	map_l100_m0_e0	het	16.6667	10.5263	40.0000	95.2381	2	17	2	3	1	33.3333
ckim-isaac	INDEL	D16_PLUS	map_l100_m0_e0	hetalt	66.6667	50.0000	100.0000	92.5926	2	2	2	0	0
ckim-isaac	INDEL	D16_PLUS	map_l100_m1_e0	homalt	23.5294	13.3333	100.0000	94.4444	2	13	2	0	0
ckim-isaac	INDEL	D16_PLUS	map_l100_m2_e0	homalt	22.2222	12.5000	100.0000	95.1220	2	14	2	0	0
ckim-isaac	INDEL	D16_PLUS	map_l100_m2_e1	homalt	22.2222	12.5000	100.0000	95.2381	2	14	2	0	0
ckim-isaac	INDEL	D16_PLUS	map_l125_m0_e0	*	26.6667	16.6667	66.6667	96.5517	2	10	2	1	0	0.0000
ckim-isaac	INDEL	D16_PLUS	map_l125_m1_e0	hetalt	80.0000	66.6667	100.0000	90.9091	2	1	2	0	0
ckim-isaac	INDEL	D16_PLUS	map_l125_m2_e0	hetalt	80.0000	66.6667	100.0000	93.1034	2	1	2	0	0
ckim-isaac	INDEL	D16_PLUS	map_l125_m2_e1	hetalt	66.6667	50.0000	100.0000	93.1034	2	2	2	0	0
ckim-isaac	INDEL	D16_PLUS	map_l150_m1_e0	*	22.2222	13.3333	66.6667	97.7099	2	13	2	1	0	0.0000
ckim-isaac	INDEL	D16_PLUS	map_l150_m2_e0	het	21.0526	12.5000	66.6667	97.5806	2	14	2	1	0	0.0000
ckim-isaac	INDEL	D16_PLUS	map_l150_m2_e1	het	21.0526	12.5000	66.6667	97.6190	2	14	2	1	0	0.0000
ckim-isaac	INDEL	D16_PLUS	tech_badpromoters	het	85.7143	75.0000	100.0000	0.0000	3	1	2	0	0
ckim-isaac	INDEL	D1_5	decoy	het	100.0000	100.0000	100.0000	99.9618	2	0	2	0	0
ckim-isaac	INDEL	D1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	98.7805	2	0	2	0	0
ckim-isaac	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	98.7730	2	0	2	0	0
ckim-isaac	INDEL	D1_5	map_l125_m0_e0	hetalt	80.0000	66.6667	100.0000	98.0000	2	1	2	0	0
ckim-isaac	INDEL	D1_5	tech_badpromoters	hetalt	100.0000	100.0000	100.0000	0.0000	2	0	2	0	0
ckim-isaac	INDEL	D6_15	func_cds	hetalt	66.6667	50.0000	100.0000	66.6667	1	1	2	0	0
ckim-isaac	INDEL	D6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het	80.0000	66.6667	100.0000	96.8750	2	1	2	0	0
ckim-isaac	INDEL	D6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	92.0000	2	0	2	0	0
ckim-isaac	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	91.3043	2	0	2	0	0
ckim-isaac	INDEL	D6_15	map_l150_m0_e0	homalt	44.4444	28.5714	100.0000	90.4762	2	5	2	0	0
ckim-isaac	INDEL	D6_15	map_l250_m0_e0	*	50.0000	33.3333	100.0000	98.5612	2	4	2	0	0

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