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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1006 1007 1008 1009 1010 1011 1012 1013 1014 ... 1720 1721 » 50451-50500 / 86044 show all
ckim-vqsr	INDEL	I6_15	map_l250_m2_e0	homalt	80.0000	66.6667	100.0000	98.0583	2	1	2	0	0
ckim-vqsr	INDEL	I6_15	map_l250_m2_e1	homalt	80.0000	66.6667	100.0000	98.1308	2	1	2	0	0
ckim-vqsr	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	90.9091	2	0	2	0	0
ckim-vqsr	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	89.4737	2	0	2	0	0
ckim-vqsr	SNP	*	lowcmp_SimpleRepeat_triTR_51to200	homalt	100.0000	100.0000	100.0000	97.4684	2	0	2	0	0
ckim-vqsr	SNP	*	map_l100_m0_e0	hetalt	22.2222	12.5000	100.0000	98.1308	2	14	2	0	0
ckim-vqsr	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	93.7500	2	0	2	0	0
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	100.0000	100.0000	100.0000	80.0000	2	0	2	0	0
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_triTR_51to200	homalt	100.0000	100.0000	100.0000	96.9697	2	0	2	0	0
ckim-vqsr	SNP	ti	map_l100_m0_e0	hetalt	25.0000	14.2857	100.0000	97.2973	2	12	2	0	0
dgrover-gatk	INDEL	D6_15	map_l250_m1_e0	hetalt	100.0000	100.0000	100.0000	96.0000	2	0	2	0	0
dgrover-gatk	INDEL	D6_15	map_l250_m2_e0	hetalt	100.0000	100.0000	100.0000	96.8750	2	0	2	0	0
dgrover-gatk	INDEL	D6_15	map_l250_m2_e1	hetalt	100.0000	100.0000	100.0000	96.9231	2	0	2	0	0
dgrover-gatk	INDEL	I16_PLUS	func_cds	homalt	100.0000	100.0000	100.0000	88.2353	2	0	2	0	0
dgrover-gatk	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	*	66.6667	50.0000	100.0000	93.5484	2	2	2	0	0
dgrover-gatk	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	hetalt	66.6667	50.0000	100.0000	77.7778	1	1	2	0	0
dgrover-gatk	INDEL	I16_PLUS	map_l100_m0_e0	homalt	80.0000	100.0000	66.6667	98.2558	2	0	2	1	0	0.0000
dgrover-gatk	INDEL	I16_PLUS	map_l100_m1_e0	hetalt	80.0000	66.6667	100.0000	92.3077	2	1	2	0	0
dgrover-gatk	INDEL	I16_PLUS	map_l100_m2_e0	hetalt	80.0000	66.6667	100.0000	93.7500	2	1	2	0	0
dgrover-gatk	INDEL	I16_PLUS	map_l100_m2_e1	hetalt	80.0000	66.6667	100.0000	93.9394	2	1	2	0	0
dgrover-gatk	INDEL	I16_PLUS	map_l125_m0_e0	homalt	80.0000	100.0000	66.6667	98.0263	2	0	2	1	0	0.0000
dgrover-gatk	INDEL	I16_PLUS	map_l125_m1_e0	hetalt	80.0000	66.6667	100.0000	88.8889	2	1	2	0	0
dgrover-gatk	INDEL	I16_PLUS	map_l125_m2_e0	hetalt	80.0000	66.6667	100.0000	90.4762	2	1	2	0	0
dgrover-gatk	INDEL	I16_PLUS	map_l125_m2_e1	hetalt	80.0000	66.6667	100.0000	90.4762	2	1	2	0	0
dgrover-gatk	INDEL	I16_PLUS	map_l150_m0_e0	het	80.0000	100.0000	66.6667	97.6744	2	0	2	1	0	0.0000
dgrover-gatk	INDEL	I16_PLUS	tech_badpromoters	het	100.0000	100.0000	100.0000	75.0000	2	0	2	0	0
dgrover-gatk	INDEL	I16_PLUS	tech_badpromoters	homalt	100.0000	100.0000	100.0000	66.6667	2	0	2	0	0
dgrover-gatk	INDEL	I1_5	func_cds	hetalt	100.0000	100.0000	100.0000	33.3333	2	0	2	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_51to200	het	80.0000	100.0000	66.6667	91.6667	2	0	2	1	0	0.0000
dgrover-gatk	INDEL	I1_5	map_l250_m1_e0	hetalt	100.0000	100.0000	100.0000	98.0583	2	0	2	0	0
dgrover-gatk	INDEL	I1_5	map_l250_m2_e0	hetalt	100.0000	100.0000	100.0000	98.4496	2	0	2	0	0
dgrover-gatk	INDEL	I1_5	map_l250_m2_e1	hetalt	100.0000	100.0000	100.0000	98.4733	2	0	2	0	0
dgrover-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_gt10	*	100.0000	100.0000	100.0000	99.8675	2	0	2	0	0
dgrover-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt	100.0000	100.0000	100.0000	99.3958	2	0	2	0	0
dgrover-gatk	INDEL	I6_15	map_l250_m1_e0	homalt	80.0000	66.6667	100.0000	97.8261	2	1	2	0	0
dgrover-gatk	INDEL	I6_15	map_l250_m2_e0	homalt	80.0000	66.6667	100.0000	97.9592	2	1	2	0	0
dgrover-gatk	INDEL	I6_15	map_l250_m2_e1	homalt	80.0000	66.6667	100.0000	98.0769	2	1	2	0	0
dgrover-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	91.3043	2	0	2	0	0
dgrover-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	90.0000	2	0	2	0	0
dgrover-gatk	SNP	*	lowcmp_SimpleRepeat_triTR_51to200	homalt	100.0000	100.0000	100.0000	97.3333	2	0	2	0	0
dgrover-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	92.3077	2	0	2	0	0
dgrover-gatk	SNP	ti	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	100.0000	100.0000	100.0000	80.0000	2	0	2	0	0
dgrover-gatk	SNP	ti	lowcmp_SimpleRepeat_triTR_51to200	homalt	100.0000	100.0000	100.0000	96.7742	2	0	2	0	0
dgrover-gatk	SNP	ti	segdup	hetalt	100.0000	100.0000	100.0000	98.6207	2	0	2	0	0
dgrover-gatk	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	91.3043	2	0	2	0	0
dgrover-gatk	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	90.0000	2	0	2	0	0
egarrison-hhga	INDEL	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt	57.1429	40.0000	100.0000	99.8373	2	3	2	0	0
egarrison-hhga	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt	66.6667	50.0000	100.0000	99.8337	2	2	2	0	0
egarrison-hhga	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	*	66.6667	66.6667	66.6667	99.5787	2	1	2	1	1	100.0000
egarrison-hhga	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het	80.0000	100.0000	66.6667	97.3214	2	0	2	1	1	100.0000

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