PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TP Query FPFP gt% FP ma
50401-50450 / 86044 show all
eyeh-varpipeINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
50.0000
33.3333
100.0000
98.7805
12200
eyeh-varpipeINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
80.0000
66.6667
100.0000
99.0148
21200
eyeh-varpipeINDEL*tech_badpromotershetalt
66.6667
50.0000
100.0000
77.7778
22200
eyeh-varpipeINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
0.0000
0.0000
100.0000
93.3333
00200
eyeh-varpipeINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
0.0000
0.0000
100.0000
93.1034
00200
eyeh-varpipeINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
0.0000
0.0000
100.0000
90.0000
00200
eyeh-varpipeINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
50.0000
93.3333
00220
0.0000
eyeh-varpipeINDELC16_PLUSlowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.0000
100.0000
98.7261
00200
eyeh-varpipeINDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10*
0.0000
0.0000
100.0000
92.0000
00200
eyeh-varpipeINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50het
0.0000
0.0000
100.0000
93.3333
00200
eyeh-varpipeINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
66.6667
86.9565
00210
0.0000
eyeh-varpipeINDELC16_PLUSlowcmp_SimpleRepeat_triTR_11to50*
0.0000
0.0000
100.0000
90.9091
00200
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
66.6667
97.2222
00211
100.0000
ckim-vqsrINDELD16_PLUSmap_l125_m0_e0homalt
100.0000
100.0000
100.0000
97.9167
20200
ckim-vqsrINDELD1_5decoyhet
100.0000
100.0000
100.0000
99.9857
20200
ckim-vqsrINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.3769
20200
ckim-vqsrINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.3590
20200
ckim-vqsrINDELD1_5map_l125_m0_e0hetalt
80.0000
66.6667
100.0000
98.5185
21200
ckim-vqsrINDELD1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
20200
ckim-vqsrINDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
60.0000
20200
ckim-vqsrINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
89.4737
20200
ckim-vqsrINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.4252
20200
ckim-vqsrINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
84.6154
20200
ckim-vqsrINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
92.0000
20200
ckim-vqsrINDELD6_15map_l250_m0_e0homalt
100.0000
100.0000
100.0000
97.4684
20200
ckim-vqsrINDELD6_15map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
96.6667
20200
ckim-vqsrINDELD6_15map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
97.2973
20200
ckim-vqsrINDELD6_15map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
97.3333
20200
ckim-vqsrINDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
88.2353
20200
ckim-vqsrINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200*
66.6667
50.0000
100.0000
93.1034
22200
ckim-vqsrINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
66.6667
50.0000
100.0000
75.0000
11200
ckim-vqsrINDELI16_PLUSmap_l100_m0_e0homalt
100.0000
100.0000
100.0000
98.8304
20200
ckim-vqsrINDELI16_PLUSmap_l100_m1_e0hetalt
80.0000
66.6667
100.0000
94.2857
21200
ckim-vqsrINDELI16_PLUSmap_l100_m2_e0hetalt
80.0000
66.6667
100.0000
94.8718
21200
ckim-vqsrINDELI16_PLUSmap_l100_m2_e1hetalt
80.0000
66.6667
100.0000
95.0000
21200
ckim-vqsrINDELI16_PLUSmap_l125_m0_e0homalt
100.0000
100.0000
100.0000
98.6755
20200
ckim-vqsrINDELI16_PLUSmap_l125_m1_e0hetalt
80.0000
66.6667
100.0000
92.0000
21200
ckim-vqsrINDELI16_PLUSmap_l125_m2_e0hetalt
80.0000
66.6667
100.0000
92.3077
21200
ckim-vqsrINDELI16_PLUSmap_l125_m2_e1hetalt
80.0000
66.6667
100.0000
92.3077
21200
ckim-vqsrINDELI16_PLUSmap_l150_m0_e0het
80.0000
100.0000
66.6667
98.0892
20210
0.0000
ckim-vqsrINDELI16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
75.0000
20200
ckim-vqsrINDELI16_PLUStech_badpromotershomalt
100.0000
100.0000
100.0000
66.6667
20200
ckim-vqsrINDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
0.0000
20200
ckim-vqsrINDELI1_5lowcmp_SimpleRepeat_triTR_51to200het
80.0000
100.0000
66.6667
91.8919
20210
0.0000
ckim-vqsrINDELI1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
97.8947
20200
ckim-vqsrINDELI1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
98.3051
20200
ckim-vqsrINDELI1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
98.3333
20200
ckim-vqsrINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.8656
20200
ckim-vqsrINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.3243
20200
ckim-vqsrINDELI6_15map_l250_m1_e0homalt
80.0000
66.6667
100.0000
97.8261
21200