PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TP Query FPFP gt% FP ma
50051-50100 / 86044 show all
bgallagher-sentieonINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
92.8571
20200
bgallagher-sentieonINDELD6_15map_l250_m0_e0homalt
100.0000
100.0000
100.0000
97.3684
20200
bgallagher-sentieonINDELD6_15map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
95.9184
20200
bgallagher-sentieonINDELD6_15map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
96.6667
20200
bgallagher-sentieonINDELD6_15map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
96.7213
20200
bgallagher-sentieonINDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
88.2353
20200
bgallagher-sentieonINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200*
66.6667
50.0000
100.0000
93.3333
22200
bgallagher-sentieonINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
66.6667
50.0000
100.0000
71.4286
11200
bgallagher-sentieonINDELI16_PLUSmap_l100_m0_e0homalt
80.0000
100.0000
66.6667
98.2759
20210
0.0000
bgallagher-sentieonINDELI16_PLUSmap_l100_m1_e0hetalt
80.0000
66.6667
100.0000
91.6667
21200
bgallagher-sentieonINDELI16_PLUSmap_l100_m2_e0hetalt
80.0000
66.6667
100.0000
93.5484
21200
bgallagher-sentieonINDELI16_PLUSmap_l100_m2_e1hetalt
80.0000
66.6667
100.0000
93.7500
21200
bgallagher-sentieonINDELI16_PLUSmap_l125_m0_e0homalt
80.0000
100.0000
66.6667
98.0392
20210
0.0000
bgallagher-sentieonINDELI16_PLUSmap_l125_m1_e0hetalt
80.0000
66.6667
100.0000
88.2353
21200
bgallagher-sentieonINDELI16_PLUSmap_l125_m2_e0hetalt
80.0000
66.6667
100.0000
90.4762
21200
bgallagher-sentieonINDELI16_PLUSmap_l125_m2_e1hetalt
80.0000
66.6667
100.0000
90.4762
21200
bgallagher-sentieonINDELI16_PLUSmap_l150_m0_e0het
80.0000
100.0000
66.6667
97.5806
20210
0.0000
bgallagher-sentieonINDELI16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
75.0000
20200
bgallagher-sentieonINDELI16_PLUStech_badpromotershomalt
100.0000
100.0000
100.0000
66.6667
20200
bgallagher-sentieonINDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
33.3333
20200
bgallagher-sentieonINDELI1_5lowcmp_SimpleRepeat_triTR_51to200het
80.0000
100.0000
66.6667
91.1765
20210
0.0000
bgallagher-sentieonINDELI1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
97.6744
20200
bgallagher-sentieonINDELI1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
98.1308
20200
bgallagher-sentieonINDELI1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
98.1651
20200
bgallagher-sentieonINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.8611
20200
bgallagher-sentieonINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.3266
20200
bgallagher-sentieonINDELI6_15map_l250_m1_e0homalt
80.0000
66.6667
100.0000
97.7778
21200
bgallagher-sentieonINDELI6_15map_l250_m2_e0homalt
80.0000
66.6667
100.0000
97.9167
21200
bgallagher-sentieonINDELI6_15map_l250_m2_e1homalt
80.0000
66.6667
100.0000
98.0392
21200
bgallagher-sentieonSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.9091
20200
bgallagher-sentieonSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
89.4737
20200
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
97.2973
20200
bgallagher-sentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
91.6667
20200
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
80.0000
20200
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
96.7213
20200
bgallagher-sentieonSNPtisegduphetalt
100.0000
100.0000
100.0000
98.5185
20200
bgallagher-sentieonSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.9091
20200
bgallagher-sentieonSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
89.4737
20200
cchapple-customINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
66.6667
50.0000
100.0000
99.7805
22200
cchapple-customINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.0000
20200
astatham-gatkINDELD16_PLUSdecoyhomalt
100.0000
100.0000
100.0000
99.0291
20200
astatham-gatkINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.1111
20200
astatham-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.1031
20200
astatham-gatkINDELD16_PLUSmap_l125_m0_e0homalt
100.0000
100.0000
100.0000
97.7011
20200
astatham-gatkINDELD1_5decoyhet
100.0000
100.0000
100.0000
99.9567
20200
astatham-gatkINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.3730
20200
astatham-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.3548
20200
astatham-gatkINDELD1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
98.0583
20200
astatham-gatkINDELD1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
20200
astatham-gatkINDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
60.0000
20200