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Explore HG002 comparison results

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Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 972 973 974 975 976 977 978 979 980 ... 1720 1721 » 48751-48800 / 86044 show all
qzeng-custom	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	76.1120	87.5000	67.3469	73.6559	21	3	33	16	14	87.5000
raldana-dualsentieon	INDEL	*	tech_badpromoters	homalt	100.0000	100.0000	100.0000	57.1429	33	0	33	0	0
ltrigg-rtg2	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	0.0000	0.0000	100.0000	95.2722	0	0	33	0	0
ltrigg-rtg2	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	95.4736	93.9394	97.0588	74.6269	31	2	33	1	1	100.0000
ltrigg-rtg2	INDEL	D6_15	map_l125_m2_e0	homalt	98.5915	97.2222	100.0000	81.5642	35	1	33	0	0
ltrigg-rtg2	INDEL	I16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	*	92.9577	89.1892	97.0588	68.8073	33	4	33	1	1	100.0000
ltrigg-rtg2	SNP	tv	lowcmp_SimpleRepeat_quadTR_51to200	*	91.0345	85.7143	97.0588	87.3606	36	6	33	1	0	0.0000
ltrigg-rtg2	SNP	tv	tech_badpromoters	het	97.0588	100.0000	94.2857	65.6863	33	0	33	2	0	0.0000
mlin-fermikit	INDEL	*	tech_badpromoters	homalt	97.0588	100.0000	94.2857	54.5455	33	0	33	2	2	100.0000
mlin-fermikit	INDEL	D16_PLUS	map_l100_m1_e0	het	65.3674	67.3913	63.4615	92.2619	31	15	33	19	8	42.1053
mlin-fermikit	INDEL	D16_PLUS	map_l100_m2_e0	het	63.1579	66.6667	60.0000	93.0991	32	16	33	22	8	36.3636
ndellapenna-hhga	INDEL	D1_5	map_l100_m2_e1	hetalt	77.1930	66.6667	91.6667	92.2414	34	17	33	3	2	66.6667
ndellapenna-hhga	INDEL	D6_15	map_l125_m1_e0	homalt	97.0588	97.0588	97.0588	88.0282	33	1	33	1	1	100.0000
gduggal-snapvard	INDEL	C6_15	lowcmp_SimpleRepeat_quadTR_11to50	het	0.0000	0.0000	30.2752	80.5357	0	0	33	76	13	17.1053
gduggal-snapplat	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	61.5923	46.3768	91.6667	79.6610	32	37	33	3	1	33.3333
gduggal-snapplat	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	homalt	18.8667	23.9437	15.5660	65.0165	17	54	33	179	132	73.7430
gduggal-snapplat	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	58.9713	44.0476	89.1892	83.3333	37	47	33	4	2	50.0000
gduggal-snapplat	INDEL	I6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	21.3305	14.5749	39.7590	79.5062	36	211	33	50	0	0.0000
gduggal-snapplat	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	26.6350	19.2090	43.4211	75.9494	34	143	33	43	0	0.0000
gduggal-snapvard	INDEL	I6_15	map_l150_m1_e0	het	63.8563	93.3333	48.5294	87.8571	14	1	33	35	27	77.1429
gduggal-snapvard	SNP	ti	tech_badpromoters	homalt	89.1892	80.4878	100.0000	42.1053	33	8	33	0	0
gduggal-snapfb	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	58.6667	66.6667	52.3810	73.7500	56	28	33	30	13	43.3333
gduggal-snapvard	SNP	tv	lowcmp_SimpleRepeat_quadTR_51to200	*	51.3219	83.3333	37.0787	89.6149	35	7	33	56	0	0.0000
ghariani-varprowl	INDEL	I6_15	segdup	homalt	84.2758	74.4681	97.0588	90.1449	35	12	33	1	1	100.0000
ghariani-varprowl	SNP	ti	lowcmp_SimpleRepeat_quadTR_51to200	homalt	81.3873	91.4286	73.3333	93.3628	32	3	33	12	4	33.3333
ghariani-varprowl	SNP	tv	lowcmp_SimpleRepeat_quadTR_51to200	het	83.4123	88.8889	78.5714	91.6667	32	4	33	9	0	0.0000
ghariani-varprowl	SNP	tv	tech_badpromoters	het	95.6522	100.0000	91.6667	63.2653	33	0	33	3	1	33.3333
bgallagher-sentieon	INDEL	D6_15	map_l125_m1_e0	homalt	98.5075	97.0588	100.0000	89.2857	33	1	33	0	0
anovak-vg	INDEL	*	lowcmp_SimpleRepeat_homopolymer_gt10	het	52.8000	37.9310	86.8421	99.9569	33	54	33	5	5	100.0000
anovak-vg	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	23.5714	33.3333	18.2320	88.4787	1	2	33	148	6	4.0541
anovak-vg	INDEL	D16_PLUS	HG002compoundhet	homalt	22.5256	75.0000	13.2530	46.6809	6	2	33	216	158	73.1481
anovak-vg	INDEL	D16_PLUS	map_l100_m2_e0	*	52.2346	37.7778	84.6154	88.4956	34	56	33	6	5	83.3333
anovak-vg	INDEL	D1_5	map_l250_m1_e0	homalt	73.0707	59.6491	94.2857	96.1957	34	23	33	2	2	100.0000
bgallagher-sentieon	INDEL	*	tech_badpromoters	homalt	100.0000	100.0000	100.0000	57.1429	33	0	33	0	0
bgallagher-sentieon	INDEL	D16_PLUS	map_siren	homalt	91.6667	97.0588	86.8421	94.0157	33	1	33	5	0	0.0000
bgallagher-sentieon	INDEL	D1_5	map_l250_m0_e0	het	91.6667	100.0000	84.6154	97.2898	33	0	33	6	0	0.0000
anovak-vg	INDEL	I1_5	map_l250_m2_e0	het	50.5360	45.4545	56.8966	97.6697	30	36	33	25	3	12.0000
anovak-vg	INDEL	I1_5	map_l250_m2_e1	het	50.5360	45.4545	56.8966	97.7255	30	36	33	25	3	12.0000
anovak-vg	INDEL	I6_15	map_l100_m2_e0	het	44.6377	34.4262	63.4615	83.5962	21	40	33	19	5	26.3158
anovak-vg	INDEL	I6_15	map_l100_m2_e1	het	44.3378	34.4262	62.2642	83.5913	21	40	33	20	5	25.0000
anovak-vg	SNP	ti	tech_badpromoters	het	83.5443	75.0000	94.2857	45.3125	33	11	33	2	2	100.0000
anovak-vg	SNP	tv	tech_badpromoters	homalt	93.1507	87.1795	100.0000	36.5385	34	5	33	0	0
astatham-gatk	INDEL	*	tech_badpromoters	homalt	100.0000	100.0000	100.0000	57.1429	33	0	33	0	0
asubramanian-gatk	INDEL	D6_15	map_l125_m2_e1	homalt	94.2857	89.1892	100.0000	90.2077	33	4	33	0	0
astatham-gatk	INDEL	D16_PLUS	map_siren	homalt	97.0588	97.0588	97.0588	94.9102	33	1	33	1	0	0.0000
astatham-gatk	INDEL	D1_5	map_l250_m0_e0	het	90.4110	100.0000	82.5000	97.2918	33	0	33	7	0	0.0000
astatham-gatk	INDEL	D6_15	map_l125_m1_e0	homalt	98.5075	97.0588	100.0000	89.2508	33	1	33	0	0
raldana-dualsentieon	INDEL	D16_PLUS	map_siren	homalt	95.6522	97.0588	94.2857	92.8571	33	1	33	2	0	0.0000
raldana-dualsentieon	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	91.6667	84.6154	100.0000	57.1429	33	6	33	0	0
raldana-dualsentieon	SNP	ti	lowcmp_SimpleRepeat_quadTR_51to200	homalt	97.0588	94.2857	100.0000	91.6667	33	2	33	0	0

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