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Explore HG002 comparison results

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Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 969 970 971 972 973 974 975 976 977 ... 1720 1721 » 48601-48650 / 86044 show all
raldana-dualsentieon	SNP	*	lowcmp_SimpleRepeat_diTR_51to200	*	86.4865	76.1905	100.0000	97.2996	32	10	32	0	0
ckim-vqsr	SNP	tv	tech_badpromoters	het	98.4615	96.9697	100.0000	54.9296	32	1	32	0	0
dgrover-gatk	INDEL	*	map_l100_m0_e0	hetalt	95.4305	93.9394	96.9697	91.1051	31	2	32	1	0	0.0000
eyeh-varpipe	INDEL	*	map_l150_m2_e1	hetalt	72.2222	56.5217	100.0000	95.3556	13	10	32	0	0
eyeh-varpipe	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	0.0000	0.0000	84.2105	96.6071	0	0	32	6	2	33.3333
dgrover-gatk	INDEL	D6_15	map_l125_m1_e0	homalt	96.9697	94.1176	100.0000	89.5765	32	2	32	0	0
dgrover-gatk	INDEL	I6_15	map_l100_m1_e0	homalt	98.4615	96.9697	100.0000	88.9655	32	1	32	0	0
dgrover-gatk	INDEL	I6_15	map_l100_m2_e0	homalt	98.4615	96.9697	100.0000	89.9687	32	1	32	0	0
dgrover-gatk	INDEL	I6_15	map_l100_m2_e1	homalt	98.4615	96.9697	100.0000	90.2439	32	1	32	0	0
dgrover-gatk	SNP	tv	tech_badpromoters	het	98.4615	96.9697	100.0000	56.1644	32	1	32	0	0
ckim-isaac	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	75.3650	64.1026	91.4286	63.5417	25	14	32	3	3	100.0000
ckim-isaac	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	83.1169	74.4186	94.1176	57.5000	32	11	32	2	1	50.0000
ckim-isaac	INDEL	I1_5	map_l100_m1_e0	hetalt	83.4783	75.0000	94.1176	87.1698	33	11	32	2	2	100.0000
ckim-isaac	INDEL	I1_5	map_l100_m2_e0	hetalt	83.4783	75.0000	94.1176	88.4354	33	11	32	2	2	100.0000
ckim-isaac	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	92.7536	88.8889	96.9697	47.6190	32	4	32	1	0	0.0000
egarrison-hhga	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_gt10	het	81.0127	76.1905	86.4865	99.3583	32	10	32	5	2	40.0000
egarrison-hhga	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	90.9953	85.7143	96.9697	69.4444	30	5	32	1	1	100.0000
ckim-vqsr	INDEL	D6_15	map_l150_m0_e0	*	96.9697	100.0000	94.1176	95.6242	32	0	32	2	0	0.0000
ckim-vqsr	INDEL	I6_15	map_l100_m1_e0	homalt	98.4615	96.9697	100.0000	89.0411	32	1	32	0	0
ckim-vqsr	INDEL	I6_15	map_l100_m2_e0	homalt	98.4615	96.9697	100.0000	90.0312	32	1	32	0	0
ckim-vqsr	INDEL	I6_15	map_l100_m2_e1	homalt	98.4615	96.9697	100.0000	90.2141	32	1	32	0	0
asubramanian-gatk	SNP	tv	map_l250_m0_e0	homalt	28.4444	16.5803	100.0000	98.7688	32	161	32	0	0
asubramanian-gatk	SNP	tv	tech_badpromoters	het	98.4615	96.9697	100.0000	56.1644	32	1	32	0	0
bgallagher-sentieon	INDEL	*	map_l100_m0_e0	hetalt	95.4305	93.9394	96.9697	90.0901	31	2	32	1	0	0.0000
asubramanian-gatk	INDEL	*	map_l100_m0_e0	hetalt	95.2381	90.9091	100.0000	91.8159	30	3	32	0	0
anovak-vg	INDEL	D6_15	func_cds	*	79.0123	74.4186	84.2105	49.3333	32	11	32	6	5	83.3333
anovak-vg	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	het	10.6916	5.9524	52.4590	42.9907	10	158	32	29	10	34.4828
asubramanian-gatk	INDEL	D16_PLUS	map_siren	homalt	95.5224	94.1176	96.9697	95.0376	32	2	32	1	0	0.0000
asubramanian-gatk	INDEL	D6_15	map_l125_m2_e0	homalt	94.1176	88.8889	100.0000	90.2736	32	4	32	0	0
asubramanian-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_51to200	*	96.4824	96.0000	96.9697	58.2278	24	1	32	1	0	0.0000
asubramanian-gatk	SNP	ti	lowcmp_SimpleRepeat_quadTR_51to200	homalt	95.5224	91.4286	100.0000	92.2892	32	3	32	0	0
astatham-gatk	INDEL	D6_15	map_l150_m0_e0	*	100.0000	100.0000	100.0000	94.8800	32	0	32	0	0
astatham-gatk	INDEL	I6_15	map_l100_m1_e0	homalt	98.4615	96.9697	100.0000	88.6121	32	1	32	0	0
astatham-gatk	INDEL	I6_15	map_l100_m2_e0	homalt	98.4615	96.9697	100.0000	89.7106	32	1	32	0	0
astatham-gatk	INDEL	I6_15	map_l100_m2_e1	homalt	98.4615	96.9697	100.0000	89.9687	32	1	32	0	0
anovak-vg	INDEL	I6_15	map_l100_m1_e0	het	45.4208	35.5932	62.7451	82.9431	21	38	32	19	5	26.3158
anovak-vg	SNP	tv	lowcmp_SimpleRepeat_quadTR_51to200	het	58.3587	75.0000	47.7612	82.0856	27	9	32	35	10	28.5714
astatham-gatk	INDEL	*	map_l100_m0_e0	hetalt	96.8750	93.9394	100.0000	91.2088	31	2	32	0	0
bgallagher-sentieon	INDEL	D6_15	map_l150_m0_e0	*	100.0000	100.0000	100.0000	94.7967	32	0	32	0	0
bgallagher-sentieon	INDEL	I6_15	map_l100_m1_e0	homalt	98.4615	96.9697	100.0000	88.8502	32	1	32	0	0
bgallagher-sentieon	INDEL	I6_15	map_l100_m2_e0	homalt	98.4615	96.9697	100.0000	89.9371	32	1	32	0	0
bgallagher-sentieon	INDEL	I6_15	map_l100_m2_e1	homalt	98.4615	96.9697	100.0000	90.1840	32	1	32	0	0
bgallagher-sentieon	SNP	tv	tech_badpromoters	het	98.4615	96.9697	100.0000	55.5556	32	1	32	0	0
cchapple-custom	INDEL	I16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	het	100.0000	100.0000	100.0000	79.0850	16	0	32	0	0
ckim-gatk	INDEL	I6_15	map_l100_m1_e0	homalt	98.4615	96.9697	100.0000	89.0411	32	1	32	0	0
ckim-gatk	INDEL	I6_15	map_l100_m2_e0	homalt	98.4615	96.9697	100.0000	90.0312	32	1	32	0	0
ckim-gatk	INDEL	I6_15	map_l100_m2_e1	homalt	98.4615	96.9697	100.0000	90.2141	32	1	32	0	0
ckim-gatk	SNP	tv	tech_badpromoters	het	98.4615	96.9697	100.0000	54.9296	32	1	32	0	0
ciseli-custom	SNP	tv	tech_badpromoters	het	73.5632	96.9697	59.2593	50.0000	32	1	32	22	0	0.0000
ckim-gatk	INDEL	D6_15	map_l150_m0_e0	*	95.5224	100.0000	91.4286	95.5013	32	0	32	3	0	0.0000

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