PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TP Query FPFP gt% FP ma
3751-3800 / 86044 show all
qzeng-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
qzeng-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
qzeng-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
qzeng-customINDELI1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
25.1397
100.0000
45134000
qzeng-customINDELI1_5lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
qzeng-customINDELI1_5lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
qzeng-customINDELI1_5lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELI1_5lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
0.0000
99.9744
010190
0.0000
qzeng-customINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
0.0000
99.9713
000140
0.0000
qzeng-customINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
01000
qzeng-customINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
0.0000
99.9783
00050
0.0000
qzeng-customINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
qzeng-customINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
qzeng-customINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELI1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
78.2609
100.0000
185000
qzeng-customINDELI1_5lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
qzeng-customINDELI1_5map_l150_m0_e0hetalt
33.3333
100.0000
12000
qzeng-customINDELI1_5map_l250_m0_e0hetalt
0.0000
100.0000
00000
qzeng-customINDELI1_5segdupwithalt*
0.0000
100.0000
00000
qzeng-customINDELI1_5segdupwithalthet
0.0000
100.0000
00000
qzeng-customINDELI1_5segdupwithalthetalt
0.0000
100.0000
00000
qzeng-customINDELI1_5segdupwithalthomalt
0.0000
100.0000
00000
qzeng-customINDELI6_15decoy*
0.0000
0.0000
99.9286
00010
0.0000
qzeng-customINDELI6_15decoyhet
0.0000
100.0000
00000
qzeng-customINDELI6_15decoyhetalt
0.0000
100.0000
00000
qzeng-customINDELI6_15decoyhomalt
0.0000
0.0000
99.5595
00010
0.0000
ltrigg-rtg2SNP*tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2SNPtidecoy*
0.0000
100.0000
00000
ltrigg-rtg2SNPtidecoyhet
0.0000
100.0000
00000
ltrigg-rtg2SNPtidecoyhetalt
0.0000
100.0000
00000
ltrigg-rtg2SNPtidecoyhomalt
0.0000
100.0000
00000
ltrigg-rtg2SNPtilowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ltrigg-rtg2SNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ltrigg-rtg2SNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg2SNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ltrigg-rtg2SNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg2SNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ltrigg-rtg2SNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ltrigg-rtg2SNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg2SNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ltrigg-rtg2SNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2SNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ltrigg-rtg2SNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ltrigg-rtg2SNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2SNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ltrigg-rtg2SNPtilowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
ltrigg-rtg2SNPtilowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000