PrecisionFDA
Truth Challenge
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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
37351-37400 / 86044 show all | |||||||||||||||
| qzeng-custom | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged | het | 0.0000 | 0.0000 | 100.0000 | 94.6429 | 0 | 0 | 3 | 0 | 0 | ||
| qzeng-custom | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged | * | 0.0000 | 0.0000 | 100.0000 | 95.0820 | 0 | 0 | 3 | 0 | 0 | ||
| qzeng-custom | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged | het | 0.0000 | 0.0000 | 100.0000 | 91.4286 | 0 | 0 | 3 | 0 | 0 | ||
| qzeng-custom | INDEL | C6_15 | map_siren | * | 0.0000 | 0.0000 | 75.0000 | 97.3154 | 0 | 0 | 3 | 1 | 1 | 100.0000 | |
| qzeng-custom | INDEL | D16_PLUS | decoy | het | 75.0000 | 100.0000 | 60.0000 | 99.4076 | 4 | 0 | 3 | 2 | 0 | 0.0000 | |
| qzeng-custom | INDEL | D16_PLUS | lowcmp_AllRepeats_gt200bp_gt95identity_merged | * | 54.5455 | 50.0000 | 60.0000 | 98.9980 | 2 | 2 | 3 | 2 | 0 | 0.0000 | |
| qzeng-custom | INDEL | D16_PLUS | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged | * | 54.5455 | 50.0000 | 60.0000 | 98.9733 | 2 | 2 | 3 | 2 | 0 | 0.0000 | |
| qzeng-custom | INDEL | D16_PLUS | map_l125_m0_e0 | homalt | 54.5455 | 100.0000 | 37.5000 | 98.6395 | 2 | 0 | 3 | 5 | 0 | 0.0000 | |
| qzeng-custom | INDEL | D16_PLUS | tech_badpromoters | * | 85.7143 | 75.0000 | 100.0000 | 40.0000 | 3 | 1 | 3 | 0 | 0 | ||
| qzeng-custom | INDEL | D16_PLUS | tech_badpromoters | het | 85.7143 | 75.0000 | 100.0000 | 0.0000 | 3 | 1 | 3 | 0 | 0 | ||
| qzeng-custom | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged | het | 92.3077 | 85.7143 | 100.0000 | 99.7823 | 6 | 1 | 3 | 0 | 0 | ||
| qzeng-custom | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged | hetalt | 95.7746 | 91.8919 | 100.0000 | 95.3846 | 68 | 6 | 3 | 0 | 0 | ||
| qzeng-custom | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged | hetalt | 95.7746 | 91.8919 | 100.0000 | 95.0000 | 34 | 3 | 3 | 0 | 0 | ||
| qzeng-custom | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged | hetalt | 89.5484 | 81.0747 | 100.0000 | 93.6170 | 6563 | 1532 | 3 | 0 | 0 | ||
| qzeng-custom | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged | hetalt | 91.3158 | 84.0193 | 100.0000 | 93.1818 | 5736 | 1091 | 3 | 0 | 0 | ||
| qzeng-custom | INDEL | D6_15 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | het | 60.0000 | 100.0000 | 42.8571 | 97.1774 | 3 | 0 | 3 | 4 | 0 | 0.0000 | |
| qzeng-custom | INDEL | D6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged | * | 60.0000 | 75.0000 | 50.0000 | 97.9021 | 3 | 1 | 3 | 3 | 0 | 0.0000 | |
| qzeng-custom | INDEL | D6_15 | map_l250_m1_e0 | homalt | 52.1739 | 40.0000 | 75.0000 | 96.4602 | 2 | 3 | 3 | 1 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | map_l100_m1_e0 | hetalt | 0.0000 | 0.0000 | 100.0000 | 88.0000 | 0 | 3 | 3 | 0 | 0 | ||
| qzeng-custom | INDEL | I16_PLUS | map_l100_m2_e0 | hetalt | 0.0000 | 0.0000 | 100.0000 | 90.0000 | 0 | 3 | 3 | 0 | 0 | ||
| qzeng-custom | INDEL | I16_PLUS | map_l100_m2_e1 | hetalt | 0.0000 | 0.0000 | 100.0000 | 90.3226 | 0 | 3 | 3 | 0 | 0 | ||
| qzeng-custom | INDEL | I16_PLUS | map_l125_m1_e0 | homalt | 48.0000 | 66.6667 | 37.5000 | 87.6923 | 2 | 1 | 3 | 5 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | map_l150_m0_e0 | het | 75.0000 | 100.0000 | 60.0000 | 95.5357 | 2 | 0 | 3 | 2 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | map_l250_m1_e0 | * | 66.6667 | 100.0000 | 50.0000 | 96.1290 | 1 | 0 | 3 | 3 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | map_l250_m1_e0 | het | 75.0000 | 100.0000 | 60.0000 | 95.4955 | 1 | 0 | 3 | 2 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | map_l250_m2_e0 | * | 66.6667 | 100.0000 | 50.0000 | 96.3415 | 1 | 0 | 3 | 3 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | map_l250_m2_e0 | het | 75.0000 | 100.0000 | 60.0000 | 95.6897 | 1 | 0 | 3 | 2 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | map_l250_m2_e1 | * | 66.6667 | 100.0000 | 50.0000 | 96.4072 | 1 | 0 | 3 | 3 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | map_l250_m2_e1 | het | 75.0000 | 100.0000 | 60.0000 | 95.7265 | 1 | 0 | 3 | 2 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | tech_badpromoters | het | 85.7143 | 100.0000 | 75.0000 | 42.8571 | 2 | 0 | 3 | 1 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I1_5 | map_l125_m0_e0 | hetalt | 66.6667 | 50.0000 | 100.0000 | 96.6292 | 2 | 2 | 3 | 0 | 0 | ||
| qzeng-custom | INDEL | I1_5 | map_l250_m2_e0 | hetalt | 66.6667 | 50.0000 | 100.0000 | 96.5517 | 1 | 1 | 3 | 0 | 0 | ||
| qzeng-custom | INDEL | I1_5 | map_l250_m2_e1 | hetalt | 66.6667 | 50.0000 | 100.0000 | 96.6292 | 1 | 1 | 3 | 0 | 0 | ||
| qzeng-custom | INDEL | I6_15 | map_l150_m1_e0 | hetalt | 50.0000 | 33.3333 | 100.0000 | 93.3333 | 1 | 2 | 3 | 0 | 0 | ||
| qzeng-custom | INDEL | I6_15 | map_l250_m0_e0 | * | 0.0000 | 0.0000 | 75.0000 | 98.7915 | 0 | 1 | 3 | 1 | 0 | 0.0000 | |
| qzeng-custom | SNP | * | lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged | hetalt | 100.0000 | 100.0000 | 100.0000 | 96.2500 | 3 | 0 | 3 | 0 | 0 | ||
| qzeng-custom | SNP | tv | lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged | hetalt | 100.0000 | 100.0000 | 100.0000 | 96.2500 | 3 | 0 | 3 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | * | decoy | homalt | 100.0000 | 100.0000 | 100.0000 | 99.9232 | 3 | 0 | 3 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | * | lowcmp_AllRepeats_gt200bp_gt95identity_merged | hetalt | 100.0000 | 100.0000 | 100.0000 | 96.2500 | 3 | 0 | 3 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | * | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged | hetalt | 100.0000 | 100.0000 | 100.0000 | 95.7143 | 3 | 0 | 3 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | * | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged | homalt | 75.0000 | 75.0000 | 75.0000 | 99.5354 | 3 | 1 | 3 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | * | tech_badpromoters | hetalt | 85.7143 | 75.0000 | 100.0000 | 57.1429 | 3 | 1 | 3 | 0 | 0 | ||
| ndellapenna-hhga | INDEL | D16_PLUS | decoy | het | 85.7143 | 75.0000 | 100.0000 | 98.9209 | 3 | 1 | 3 | 0 | 0 | ||
| ndellapenna-hhga | INDEL | D16_PLUS | map_l100_m0_e0 | hetalt | 66.6667 | 75.0000 | 60.0000 | 80.0000 | 3 | 1 | 3 | 2 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | D16_PLUS | map_l250_m1_e0 | het | 85.7143 | 100.0000 | 75.0000 | 94.9367 | 3 | 0 | 3 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | D16_PLUS | map_l250_m2_e0 | het | 85.7143 | 100.0000 | 75.0000 | 95.5056 | 3 | 0 | 3 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | D16_PLUS | map_l250_m2_e1 | het | 85.7143 | 100.0000 | 75.0000 | 95.6044 | 3 | 0 | 3 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | D1_5 | decoy | * | 100.0000 | 100.0000 | 100.0000 | 99.9488 | 4 | 0 | 3 | 0 | 0 | ||
| ndellapenna-hhga | INDEL | D1_5 | map_l125_m0_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 97.5207 | 3 | 0 | 3 | 0 | 0 | ||
| ndellapenna-hhga | INDEL | D1_5 | map_l250_m1_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 97.4359 | 3 | 0 | 3 | 0 | 0 | ||