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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 720 721 722 723 724 725 726 727 728 ... 1720 1721 » 36151-36200 / 86044 show all
ckim-vqsr	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt	100.0000	100.0000	100.0000	99.3243	2	0	2	0	0
ckim-vqsr	INDEL	I6_15	map_l250_m1_e0	homalt	80.0000	66.6667	100.0000	97.8261	2	1	2	0	0
ckim-vqsr	INDEL	I6_15	map_l250_m2_e0	homalt	80.0000	66.6667	100.0000	98.0583	2	1	2	0	0
ckim-vqsr	INDEL	I6_15	map_l250_m2_e1	homalt	80.0000	66.6667	100.0000	98.1308	2	1	2	0	0
ckim-vqsr	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	90.9091	2	0	2	0	0
ckim-vqsr	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	89.4737	2	0	2	0	0
ckim-vqsr	SNP	*	lowcmp_SimpleRepeat_triTR_51to200	homalt	100.0000	100.0000	100.0000	97.4684	2	0	2	0	0
ckim-vqsr	SNP	*	map_l100_m0_e0	hetalt	22.2222	12.5000	100.0000	98.1308	2	14	2	0	0
ckim-vqsr	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	93.7500	2	0	2	0	0
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	100.0000	100.0000	100.0000	80.0000	2	0	2	0	0
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_triTR_51to200	homalt	100.0000	100.0000	100.0000	96.9697	2	0	2	0	0
ckim-vqsr	SNP	ti	map_l100_m0_e0	hetalt	25.0000	14.2857	100.0000	97.2973	2	12	2	0	0
ckim-vqsr	SNP	ti	segdup	hetalt	100.0000	100.0000	100.0000	99.2453	2	0	2	0	0
ckim-vqsr	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	90.9091	2	0	2	0	0
ckim-vqsr	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	89.4737	2	0	2	0	0
ckim-vqsr	SNP	tv	map_l100_m0_e0	hetalt	22.2222	12.5000	100.0000	98.1308	2	14	2	0	0
dgrover-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het	100.0000	100.0000	100.0000	98.0000	2	0	2	0	0
dgrover-gatk	INDEL	D16_PLUS	decoy	homalt	100.0000	100.0000	100.0000	99.0148	2	0	2	0	0
dgrover-gatk	INDEL	D16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt	80.0000	100.0000	66.6667	98.5437	2	0	2	1	0	0.0000
dgrover-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt	80.0000	100.0000	66.6667	98.5294	2	0	2	1	0	0.0000
dgrover-gatk	INDEL	D16_PLUS	map_l125_m0_e0	homalt	100.0000	100.0000	100.0000	97.7011	2	0	2	0	0
dgrover-gatk	INDEL	D16_PLUS	map_l250_m1_e0	het	57.1429	66.6667	50.0000	97.7528	2	1	2	2	0	0.0000
dgrover-gatk	INDEL	D16_PLUS	map_l250_m2_e0	het	57.1429	66.6667	50.0000	98.1900	2	1	2	2	0	0.0000
dgrover-gatk	INDEL	D16_PLUS	map_l250_m2_e1	het	57.1429	66.6667	50.0000	98.2222	2	1	2	2	0	0.0000
dgrover-gatk	INDEL	D1_5	decoy	het	100.0000	100.0000	100.0000	99.9573	2	0	2	0	0
dgrover-gatk	INDEL	D1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	99.3750	2	0	2	0	0
dgrover-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	99.3548	2	0	2	0	0
dgrover-gatk	INDEL	D1_5	map_l150_m0_e0	hetalt	100.0000	100.0000	100.0000	98.0769	2	0	2	0	0
dgrover-gatk	INDEL	D1_5	tech_badpromoters	hetalt	100.0000	100.0000	100.0000	0.0000	2	0	2	0	0
dgrover-gatk	INDEL	D6_15	func_cds	hetalt	100.0000	100.0000	100.0000	60.0000	2	0	2	0	0
dgrover-gatk	INDEL	D6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	89.4737	2	0	2	0	0
dgrover-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het	100.0000	100.0000	100.0000	98.3607	2	0	2	0	0
dgrover-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	83.3333	2	0	2	0	0
dgrover-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	*	100.0000	100.0000	100.0000	92.8571	2	0	2	0	0
ckim-isaac	INDEL	I6_15	map_l100_m0_e0	homalt	28.5714	16.6667	100.0000	91.6667	2	10	2	0	0
ckim-isaac	INDEL	I6_15	map_l125_m0_e0	het	50.0000	33.3333	100.0000	98.4252	3	6	2	0	0
ckim-isaac	INDEL	I6_15	map_l125_m0_e0	homalt	50.0000	33.3333	100.0000	86.6667	2	4	2	0	0
ckim-isaac	INDEL	I6_15	map_l150_m0_e0	het	66.6667	50.0000	100.0000	98.1982	2	2	2	0	0
ckim-isaac	INDEL	I6_15	map_l250_m2_e0	*	40.0000	25.0000	100.0000	99.0099	2	6	2	0	0
ckim-isaac	INDEL	I6_15	map_l250_m2_e1	*	40.0000	25.0000	100.0000	99.0431	2	6	2	0	0
ckim-isaac	INDEL	I6_15	tech_badpromoters	homalt	80.0000	66.6667	100.0000	60.0000	2	1	2	0	0
ckim-isaac	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	0.0000	2	0	2	0	0
ckim-isaac	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	0.0000	2	0	2	0	0
ckim-isaac	SNP	*	map_l250_m1_e0	hetalt	66.6667	50.0000	100.0000	92.3077	2	2	2	0	0
ckim-isaac	SNP	*	map_l250_m2_e0	hetalt	57.1429	40.0000	100.0000	93.7500	2	3	2	0	0
ckim-isaac	SNP	*	map_l250_m2_e1	hetalt	57.1429	40.0000	100.0000	93.7500	2	3	2	0	0
ckim-isaac	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	60.0000	2	0	2	0	0
ckim-isaac	SNP	ti	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	100.0000	100.0000	100.0000	75.0000	2	0	2	0	0
ckim-isaac	SNP	ti	map_l250_m1_e0	hetalt	66.6667	50.0000	100.0000	88.2353	2	2	2	0	0
ckim-isaac	SNP	ti	map_l250_m2_e0	hetalt	57.1429	40.0000	100.0000	90.4762	2	3	2	0	0

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