PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TP Query FPFP gt% FP ma
3551-3600 / 86044 show all
qzeng-customINDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
84.1837
0.0000
0.0000
660124000
qzeng-customINDELD16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
56.0364
0.0000
0.0000
246193000
qzeng-customINDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200*
0.0000
100.0000
00000
qzeng-customINDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200het
0.0000
100.0000
00000
qzeng-customINDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
91.6667
0.0000
0.0000
111000
qzeng-customINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
77.7778
0.0000
0.0000
72000
qzeng-customINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
90.8537
100.0000
29830000
qzeng-customINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
79.1429
0.0000
0.0000
27773000
qzeng-customINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
qzeng-customINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
qzeng-customINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
qzeng-customINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
96.0784
0.0000
0.0000
492000
qzeng-customINDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
80.0000
0.0000
0.0000
205000
qzeng-customINDELD16_PLUSmap_l100_m0_e0hetalt
0.0000
100.0000
0.0000
0.0000
40000
qzeng-customINDELD16_PLUSmap_l100_m1_e0hetalt
0.0000
73.0769
0.0000
0.0000
197000
qzeng-customINDELD16_PLUSmap_l100_m2_e0hetalt
0.0000
73.0769
0.0000
0.0000
197000
qzeng-customINDELD16_PLUSmap_l100_m2_e1hetalt
0.0000
70.0000
0.0000
0.0000
219000
qzeng-customINDELD16_PLUSmap_l125_m0_e0hetalt
0.0000
100.0000
0.0000
0.0000
10000
qzeng-customINDELD16_PLUSmap_l125_m1_e0hetalt
0.0000
100.0000
0.0000
0.0000
30000
qzeng-customINDELD16_PLUSmap_l125_m2_e0hetalt
0.0000
100.0000
0.0000
0.0000
30000
qzeng-customINDELD16_PLUSmap_l125_m2_e1hetalt
0.0000
75.0000
0.0000
0.0000
31000
qzeng-customINDELD16_PLUSmap_l150_m0_e0hetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELD16_PLUSmap_l150_m1_e0hetalt
0.0000
100.0000
0.0000
0.0000
10000
qzeng-customINDELD16_PLUSmap_l150_m2_e0hetalt
0.0000
100.0000
0.0000
0.0000
10000
qzeng-customINDELD16_PLUSmap_l150_m2_e1hetalt
0.0000
50.0000
0.0000
0.0000
11000
qzeng-customINDELD16_PLUSmap_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELD16_PLUSmap_l250_m0_e0homalt
0.0000
100.0000
00000
qzeng-customINDELD16_PLUSmap_l250_m1_e0hetalt
0.0000
100.0000
0.0000
0.0000
10000
qzeng-customINDELD16_PLUSmap_l250_m1_e0homalt
0.0000
0.0000
99.5690
00020
0.0000
qzeng-customINDELD16_PLUSmap_l250_m2_e0hetalt
0.0000
100.0000
0.0000
0.0000
10000
qzeng-customINDELD16_PLUSmap_l250_m2_e1hetalt
0.0000
100.0000
0.0000
0.0000
10000
qzeng-customINDELD16_PLUSmap_sirenhetalt
0.0000
74.1935
0.0000
0.0000
238000
qzeng-customINDELD16_PLUSsegduphetalt
0.0000
55.5556
0.0000
0.0000
54000
qzeng-customINDELD16_PLUSsegdupwithalt*
0.0000
100.0000
00000
qzeng-customINDELD16_PLUSsegdupwithalthet
0.0000
100.0000
00000
qzeng-customINDELD16_PLUSsegdupwithalthetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELD16_PLUSsegdupwithalthomalt
0.0000
100.0000
00000
qzeng-customINDELD16_PLUStech_badpromotershetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELD16_PLUStech_badpromotershomalt
0.0000
100.0000
00000
qzeng-customINDELD1_5decoyhetalt
100.0000
100.0000
10000
qzeng-customINDELD1_5decoyhomalt
100.0000
100.0000
10000
qzeng-customINDELD1_5func_cdshetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
10000
qzeng-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
10000
qzeng-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
64.9109
100.0000
838453000
qzeng-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000