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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 699 700 701 702 703 704 705 706 707 ... 1720 1721 » 35101-35150 / 86044 show all
qzeng-custom	SNP	ti	decoy	*	0.0000	0.0000	100.0000	99.9987	0	0	2	0	0
qzeng-custom	SNP	ti	decoy	homalt	0.0000	0.0000	100.0000	99.9922	0	0	2	0	0
qzeng-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	96.0000	2	0	2	0	0
qzeng-custom	SNP	ti	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	100.0000	100.0000	100.0000	80.0000	2	0	2	0	0
qzeng-custom	SNP	ti	map_l150_m0_e0	hetalt	80.0000	66.6667	100.0000	96.8750	2	1	2	0	0
qzeng-custom	SNP	ti	map_l250_m2_e0	hetalt	57.1429	40.0000	100.0000	97.3333	2	3	2	0	0
qzeng-custom	SNP	ti	map_l250_m2_e1	hetalt	57.1429	40.0000	100.0000	97.3684	2	3	2	0	0
qzeng-custom	SNP	ti	segdup	hetalt	100.0000	100.0000	100.0000	99.0868	2	0	2	0	0
qzeng-custom	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	87.5000	2	0	2	0	0
qzeng-custom	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	85.7143	2	0	2	0	0
qzeng-custom	SNP	tv	map_l150_m0_e0	hetalt	80.0000	66.6667	100.0000	98.0392	2	1	2	0	0
qzeng-custom	SNP	tv	map_l250_m2_e0	hetalt	57.1429	40.0000	100.0000	98.3740	2	3	2	0	0
qzeng-custom	SNP	tv	map_l250_m2_e1	hetalt	57.1429	40.0000	100.0000	98.3871	2	3	2	0	0
raldana-dualsentieon	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	*	80.0000	66.6667	100.0000	97.9167	2	1	2	0	0
ndellapenna-hhga	INDEL	I16_PLUS	map_l100_m1_e0	homalt	50.0000	40.0000	66.6667	94.3396	2	3	2	1	0	0.0000
ndellapenna-hhga	INDEL	I16_PLUS	map_l100_m2_e0	homalt	50.0000	40.0000	66.6667	95.6522	2	3	2	1	0	0.0000
ndellapenna-hhga	INDEL	I16_PLUS	map_l100_m2_e1	homalt	50.0000	40.0000	66.6667	95.6522	2	3	2	1	0	0.0000
ndellapenna-hhga	INDEL	I16_PLUS	map_l125_m0_e0	het	66.6667	66.6667	66.6667	92.3077	2	1	2	1	0	0.0000
ndellapenna-hhga	INDEL	I16_PLUS	map_l150_m0_e0	het	80.0000	100.0000	66.6667	88.8889	2	0	2	1	0	0.0000
ndellapenna-hhga	INDEL	I16_PLUS	map_l150_m1_e0	hetalt	100.0000	100.0000	100.0000	71.4286	2	0	2	0	0
ndellapenna-hhga	INDEL	I16_PLUS	map_l150_m2_e0	hetalt	100.0000	100.0000	100.0000	71.4286	2	0	2	0	0
ndellapenna-hhga	INDEL	I16_PLUS	map_l150_m2_e1	hetalt	100.0000	100.0000	100.0000	71.4286	2	0	2	0	0
ndellapenna-hhga	INDEL	I16_PLUS	tech_badpromoters	het	100.0000	100.0000	100.0000	60.0000	2	0	2	0	0
ndellapenna-hhga	INDEL	I16_PLUS	tech_badpromoters	homalt	100.0000	100.0000	100.0000	66.6667	2	0	2	0	0
ndellapenna-hhga	INDEL	I1_5	func_cds	hetalt	100.0000	100.0000	100.0000	50.0000	2	0	2	0	0
ndellapenna-hhga	INDEL	I1_5	map_l250_m1_e0	hetalt	100.0000	100.0000	100.0000	98.4000	2	0	2	0	0
ndellapenna-hhga	INDEL	I1_5	map_l250_m2_e0	hetalt	100.0000	100.0000	100.0000	98.7421	2	0	2	0	0
ndellapenna-hhga	INDEL	I1_5	map_l250_m2_e1	hetalt	100.0000	100.0000	100.0000	98.7730	2	0	2	0	0
ndellapenna-hhga	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	84.6154	2	0	2	0	0
ndellapenna-hhga	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	81.8182	2	0	2	0	0
ndellapenna-hhga	SNP	*	map_l250_m1_e0	hetalt	66.6667	50.0000	100.0000	95.4545	2	2	2	0	0
ndellapenna-hhga	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	94.7368	2	0	2	0	0
ndellapenna-hhga	SNP	ti	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	100.0000	100.0000	100.0000	81.8182	2	0	2	0	0
ndellapenna-hhga	SNP	ti	map_l250_m1_e0	hetalt	66.6667	50.0000	100.0000	93.1034	2	2	2	0	0
ndellapenna-hhga	SNP	ti	segdup	hetalt	100.0000	100.0000	100.0000	99.0698	2	0	2	0	0
ndellapenna-hhga	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	84.6154	2	0	2	0	0
ndellapenna-hhga	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	81.8182	2	0	2	0	0
ndellapenna-hhga	SNP	tv	map_l250_m1_e0	hetalt	66.6667	50.0000	100.0000	95.4545	2	2	2	0	0
qzeng-custom	INDEL	*	decoy	homalt	50.0000	100.0000	33.3333	99.8717	3	0	2	4	0	0.0000
qzeng-custom	INDEL	*	func_cds	hetalt	75.0000	60.0000	100.0000	33.3333	3	2	2	0	0
qzeng-custom	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	*	80.0000	100.0000	66.6667	98.3871	3	0	2	1	0	0.0000
qzeng-custom	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het	80.0000	100.0000	66.6667	98.1481	2	0	2	1	0	0.0000
qzeng-custom	INDEL	*	tech_badpromoters	hetalt	100.0000	100.0000	100.0000	66.6667	4	0	2	0	0
qzeng-custom	INDEL	C16_PLUS	HG002compoundhet	*	0.0000	0.0000	3.0769	55.1724	0	0	2	63	0	0.0000
qzeng-custom	INDEL	C16_PLUS	HG002compoundhet	het	0.0000	0.0000	4.7619	50.0000	0	0	2	40	0	0.0000
qzeng-custom	INDEL	C16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	0.0000	0.0000	1.5625	65.4054	0	0	2	126	0	0.0000
qzeng-custom	INDEL	C16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	0.0000	0.0000	3.7736	82.9582	0	0	2	51	0	0.0000
qzeng-custom	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	0.0000	0.0000	11.7647	95.0292	0	0	2	15	0	0.0000
qzeng-custom	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	*	0.0000	0.0000	20.0000	91.1504	0	0	2	8	0	0.0000
qzeng-custom	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	0.0000	0.0000	25.0000	85.9649	0	0	2	6	0	0.0000

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