PrecisionFDA
Truth Challenge
Engage and improve DNA test results with our community challenges
Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
3201-3250 / 86044 show all | |||||||||||||||
| mlin-fermikit | SNP | tv | lowcmp_SimpleRepeat_quadTR_51to200 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| mlin-fermikit | SNP | tv | lowcmp_SimpleRepeat_quadTR_gt200 | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| mlin-fermikit | SNP | tv | lowcmp_SimpleRepeat_quadTR_gt200 | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| mlin-fermikit | SNP | tv | lowcmp_SimpleRepeat_quadTR_gt200 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| mlin-fermikit | SNP | tv | lowcmp_SimpleRepeat_quadTR_gt200 | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| mlin-fermikit | SNP | tv | lowcmp_SimpleRepeat_triTR_51to200 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| mlin-fermikit | SNP | tv | lowcmp_SimpleRepeat_triTR_51to200 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| mlin-fermikit | SNP | tv | map_l125_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 9 | 0 | 0 | 0 | ||||
| mlin-fermikit | SNP | tv | map_l150_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 3 | 0 | 0 | 0 | ||||
| mlin-fermikit | SNP | tv | map_l250_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| mlin-fermikit | SNP | tv | map_l250_m1_e0 | hetalt | 0.0000 | 100.0000 | 0 | 4 | 0 | 0 | 0 | ||||
| mlin-fermikit | SNP | tv | map_l250_m2_e0 | hetalt | 0.0000 | 100.0000 | 0 | 5 | 0 | 0 | 0 | ||||
| mlin-fermikit | SNP | tv | map_l250_m2_e1 | hetalt | 0.0000 | 100.0000 | 0 | 5 | 0 | 0 | 0 | ||||
| mlin-fermikit | SNP | tv | segdupwithalt | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| mlin-fermikit | SNP | tv | segdupwithalt | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| mlin-fermikit | SNP | tv | segdupwithalt | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| mlin-fermikit | SNP | tv | segdupwithalt | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| mlin-fermikit | SNP | tv | tech_badpromoters | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ndellapenna-hhga | INDEL | * | decoy | hetalt | 100.0000 | 100.0000 | 1 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | C16_PLUS | lowcmp_SimpleRepeat_triTR_51to200 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | C16_PLUS | map_l100_m0_e0 | * | 0.0000 | 0.0000 | 83.8235 | 0 | 0 | 0 | 11 | 0 | 0.0000 | ||
| qzeng-custom | INDEL | C16_PLUS | map_l100_m0_e0 | het | 0.0000 | 0.0000 | 75.7576 | 0 | 0 | 0 | 8 | 0 | 0.0000 | ||
| qzeng-custom | INDEL | C16_PLUS | map_l100_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| qzeng-custom | INDEL | C16_PLUS | map_l100_m0_e0 | homalt | 0.0000 | 0.0000 | 91.4286 | 0 | 0 | 0 | 3 | 0 | 0.0000 | ||
| qzeng-custom | INDEL | C16_PLUS | map_l100_m1_e0 | * | 0.0000 | 0.0000 | 77.1654 | 0 | 0 | 0 | 29 | 0 | 0.0000 | ||
| qzeng-custom | INDEL | C16_PLUS | map_l100_m1_e0 | het | 0.0000 | 0.0000 | 72.7273 | 0 | 0 | 0 | 21 | 0 | 0.0000 | ||
| qzeng-custom | INDEL | C16_PLUS | map_l100_m1_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| qzeng-custom | INDEL | C16_PLUS | map_l100_m1_e0 | homalt | 0.0000 | 0.0000 | 84.0000 | 0 | 0 | 0 | 8 | 0 | 0.0000 | ||
| qzeng-custom | INDEL | C16_PLUS | map_l100_m2_e0 | * | 0.0000 | 0.0000 | 79.5775 | 0 | 0 | 0 | 29 | 0 | 0.0000 | ||
| qzeng-custom | INDEL | C16_PLUS | map_l100_m2_e0 | het | 0.0000 | 0.0000 | 76.1364 | 0 | 0 | 0 | 21 | 0 | 0.0000 | ||
| qzeng-custom | INDEL | C16_PLUS | map_l100_m2_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| qzeng-custom | INDEL | C16_PLUS | map_l100_m2_e0 | homalt | 0.0000 | 0.0000 | 85.1852 | 0 | 0 | 0 | 8 | 0 | 0.0000 | ||
| qzeng-custom | INDEL | C16_PLUS | map_l100_m2_e1 | * | 0.0000 | 0.0000 | 79.8611 | 0 | 0 | 0 | 29 | 0 | 0.0000 | ||
| qzeng-custom | INDEL | C16_PLUS | map_l100_m2_e1 | het | 0.0000 | 0.0000 | 76.6667 | 0 | 0 | 0 | 21 | 0 | 0.0000 | ||
| qzeng-custom | INDEL | C16_PLUS | map_l100_m2_e1 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| qzeng-custom | INDEL | C16_PLUS | map_l100_m2_e1 | homalt | 0.0000 | 0.0000 | 85.1852 | 0 | 0 | 0 | 8 | 0 | 0.0000 | ||
| qzeng-custom | INDEL | C16_PLUS | map_l125_m0_e0 | * | 0.0000 | 0.0000 | 89.1304 | 0 | 0 | 0 | 5 | 0 | 0.0000 | ||
| qzeng-custom | INDEL | C16_PLUS | map_l125_m0_e0 | het | 0.0000 | 0.0000 | 85.1852 | 0 | 0 | 0 | 4 | 0 | 0.0000 | ||
| qzeng-custom | INDEL | C16_PLUS | map_l125_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| qzeng-custom | INDEL | C16_PLUS | map_l125_m0_e0 | homalt | 0.0000 | 0.0000 | 94.7368 | 0 | 0 | 0 | 1 | 0 | 0.0000 | ||
| qzeng-custom | INDEL | C16_PLUS | map_l125_m1_e0 | * | 0.0000 | 0.0000 | 87.3239 | 0 | 0 | 0 | 9 | 0 | 0.0000 | ||
| qzeng-custom | INDEL | C16_PLUS | map_l125_m1_e0 | het | 0.0000 | 0.0000 | 83.7209 | 0 | 0 | 0 | 7 | 0 | 0.0000 | ||
| qzeng-custom | INDEL | C16_PLUS | map_l125_m1_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| qzeng-custom | INDEL | C16_PLUS | map_l125_m1_e0 | homalt | 0.0000 | 0.0000 | 92.8571 | 0 | 0 | 0 | 2 | 0 | 0.0000 | ||
| qzeng-custom | INDEL | C16_PLUS | map_l125_m2_e0 | * | 0.0000 | 0.0000 | 88.6076 | 0 | 0 | 0 | 9 | 0 | 0.0000 | ||
| qzeng-custom | INDEL | C16_PLUS | map_l125_m2_e0 | het | 0.0000 | 0.0000 | 85.4167 | 0 | 0 | 0 | 7 | 0 | 0.0000 | ||
| qzeng-custom | INDEL | C16_PLUS | map_l125_m2_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| qzeng-custom | INDEL | C16_PLUS | map_l125_m2_e0 | homalt | 0.0000 | 0.0000 | 93.5484 | 0 | 0 | 0 | 2 | 0 | 0.0000 | ||
| qzeng-custom | INDEL | C16_PLUS | map_l125_m2_e1 | * | 0.0000 | 0.0000 | 88.8889 | 0 | 0 | 0 | 9 | 0 | 0.0000 | ||
| qzeng-custom | INDEL | C16_PLUS | map_l125_m2_e1 | het | 0.0000 | 0.0000 | 85.4167 | 0 | 0 | 0 | 7 | 0 | 0.0000 | ||