PrecisionFDA
Truth Challenge
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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
14501-14550 / 86044 show all | |||||||||||||||
gduggal-bwavard | INDEL | D16_PLUS | map_l125_m2_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 3 | 0 | 0 | 0 | |||
gduggal-bwavard | INDEL | D16_PLUS | map_l125_m2_e1 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 4 | 0 | 0 | 0 | |||
gduggal-bwavard | INDEL | D16_PLUS | map_l150_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
gduggal-bwavard | INDEL | D16_PLUS | map_l150_m0_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
gduggal-bwavard | INDEL | D16_PLUS | map_l150_m1_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 1 | 0 | 0 | 0 | |||
gduggal-bwavard | INDEL | D16_PLUS | map_l150_m1_e0 | homalt | 0.0000 | 0.0000 | 98.0769 | 0 | 0 | 0 | 1 | 1 | 100.0000 | ||
gduggal-bwavard | INDEL | D16_PLUS | map_l150_m2_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 1 | 0 | 0 | 0 | |||
gduggal-bwavard | INDEL | D16_PLUS | map_l150_m2_e0 | homalt | 0.0000 | 0.0000 | 98.2143 | 0 | 0 | 0 | 1 | 1 | 100.0000 | ||
gduggal-bwavard | INDEL | D16_PLUS | map_l150_m2_e1 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 2 | 0 | 0 | 0 | |||
gduggal-bwavard | INDEL | D16_PLUS | map_l150_m2_e1 | homalt | 0.0000 | 0.0000 | 98.2456 | 0 | 0 | 0 | 1 | 1 | 100.0000 | ||
gduggal-bwavard | INDEL | D16_PLUS | map_l250_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
gduggal-bwavard | INDEL | D16_PLUS | map_l250_m0_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
gduggal-bwavard | INDEL | D16_PLUS | map_l250_m1_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 1 | 0 | 0 | 0 | |||
gduggal-bwavard | INDEL | D16_PLUS | map_l250_m1_e0 | homalt | 0.0000 | 0.0000 | 96.8750 | 0 | 0 | 0 | 1 | 1 | 100.0000 | ||
gduggal-bwavard | INDEL | D16_PLUS | map_l250_m2_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 1 | 0 | 0 | 0 | |||
gduggal-bwavard | INDEL | D16_PLUS | map_l250_m2_e1 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 1 | 0 | 0 | 0 | |||
gduggal-bwavard | INDEL | D16_PLUS | map_siren | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 31 | 0 | 0 | 0 | |||
gduggal-bwavard | INDEL | D16_PLUS | segdup | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 9 | 0 | 0 | 0 | |||
gduggal-bwavard | INDEL | D16_PLUS | segdupwithalt | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
gduggal-bwavard | INDEL | D16_PLUS | segdupwithalt | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
gduggal-bwavard | INDEL | D16_PLUS | segdupwithalt | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
gduggal-bwavard | INDEL | D16_PLUS | segdupwithalt | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
gduggal-bwavard | INDEL | D16_PLUS | tech_badpromoters | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
gduggal-bwavard | INDEL | D16_PLUS | tech_badpromoters | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
gduggal-bwavard | INDEL | D1_5 | * | hetalt | 0.0000 | 0.3904 | 0.0000 | 0.0000 | 40 | 10205 | 0 | 0 | 0 | ||
gduggal-bwavard | INDEL | D1_5 | HG002complexvar | hetalt | 0.0000 | 2.8846 | 0.0000 | 0.0000 | 39 | 1313 | 0 | 0 | 0 | ||
gduggal-bwavard | INDEL | D1_5 | HG002compoundhet | hetalt | 0.0000 | 0.3622 | 0.0000 | 0.0000 | 37 | 10179 | 0 | 0 | 0 | ||
gduggal-bwavard | INDEL | D1_5 | decoy | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 1 | 0 | 0 | 0 | |||
gduggal-bwavard | INDEL | D1_5 | func_cds | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
gduggal-bwavard | INDEL | D1_5 | lowcmp_AllRepeats_51to200bp_gt95identity_merged | hetalt | 0.0000 | 0.2195 | 0.0000 | 0.0000 | 4 | 1818 | 0 | 0 | 0 | ||
gduggal-bwavard | INDEL | D1_5 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 1 | 0 | 0 | 0 | |||
gduggal-bwavard | INDEL | D1_5 | lowcmp_AllRepeats_lt51bp_gt95identity_merged | hetalt | 0.0000 | 0.3873 | 0.0000 | 0.0000 | 36 | 9260 | 0 | 0 | 0 | ||
gduggal-bwavard | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331 | hetalt | 0.0000 | 0.2798 | 0.0000 | 0.0000 | 26 | 9265 | 0 | 0 | 0 | ||
gduggal-bwavard | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 69 | 0 | 0 | 0 | |||
gduggal-bwavard | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 1 | 0 | 0 | 0 | |||
gduggal-bwavard | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 74 | 0 | 0 | 0 | |||
gduggal-bwavard | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 37 | 0 | 0 | 0 | |||
gduggal-bwavard | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged | hetalt | 0.0000 | 0.2324 | 0.0000 | 0.0000 | 3 | 1288 | 0 | 0 | 0 | ||
gduggal-bwavard | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
gduggal-bwavard | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
gduggal-bwavard | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged | hetalt | 0.0000 | 0.2347 | 0.0000 | 0.0000 | 19 | 8076 | 0 | 0 | 0 | ||
gduggal-bwavard | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged | hetalt | 0.0000 | 0.2344 | 0.0000 | 0.0000 | 16 | 6811 | 0 | 0 | 0 | ||
gduggal-bwavard | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged | hetalt | 0.0000 | 0.2325 | 0.0000 | 0.0000 | 19 | 8154 | 0 | 0 | 0 | ||
gduggal-bwavard | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged | hetalt | 0.0000 | 0.2798 | 0.0000 | 0.0000 | 26 | 9265 | 0 | 0 | 0 | ||
gduggal-bwavard | INDEL | D1_5 | lowcmp_SimpleRepeat_diTR_11to50 | hetalt | 0.0000 | 0.3631 | 0.0000 | 0.0000 | 25 | 6861 | 0 | 0 | 0 | ||
gduggal-bwavard | INDEL | D1_5 | lowcmp_SimpleRepeat_diTR_51to200 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 491 | 0 | 0 | 0 | |||
gduggal-bwavard | INDEL | D1_5 | lowcmp_SimpleRepeat_diTR_51to200 | homalt | 0.0000 | 100.0000 | 0 | 71 | 0 | 0 | 0 | ||||
gduggal-bwavard | INDEL | D1_5 | lowcmp_SimpleRepeat_diTR_gt200 | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
gduggal-bwavard | INDEL | D1_5 | lowcmp_SimpleRepeat_diTR_gt200 | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
gduggal-bwavard | INDEL | D1_5 | lowcmp_SimpleRepeat_diTR_gt200 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 |