PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TP Query FPFP gt% FP ma
11651-11700 / 86044 show all
anovak-vgSNPtvmap_l250_m2_e0hetalt
0.0000
20.0000
0.0000
0.0000
14000
anovak-vgSNPtvmap_l250_m2_e1hetalt
0.0000
20.0000
0.0000
0.0000
14000
anovak-vgSNPtvmap_sirenhetalt
0.0000
25.9259
0.0000
0.0000
2160000
anovak-vgSNPtvsegduphetalt
0.0000
14.2857
0.0000
0.0000
16000
anovak-vgSNPtvsegdupwithalt*
0.0000
100.0000
00000
anovak-vgSNPtvsegdupwithalthet
0.0000
100.0000
00000
anovak-vgSNPtvsegdupwithalthetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtvsegdupwithalthomalt
0.0000
100.0000
00000
anovak-vgSNPtvtech_badpromotershetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
astatham-gatkINDEL*lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
astatham-gatkINDEL*lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
astatham-gatkINDEL*lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDEL*lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
astatham-gatkINDEL*map_l250_m0_e0hetalt
0.0000
100.0000
00000
astatham-gatkINDEL*segdupwithalthetalt
0.0000
100.0000
00000
astatham-gatkINDEL*segdupwithalthomalt
0.0000
100.0000
00000
astatham-gatkINDELC16_PLUS**
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUS*het
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUS*hetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUS*homalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSHG002complexvar*
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSHG002complexvarhet
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSHG002complexvarhetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSHG002complexvarhomalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSHG002compoundhet*
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSHG002compoundhethet
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSHG002compoundhethetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSHG002compoundhethomalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSdecoy*
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSdecoyhet
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSdecoyhetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSdecoyhomalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSfunc_cds*
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSfunc_cdshet
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSfunc_cdshomalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331*
0.0000
0.0000
0.0000
00000