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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1717 1718 1719 1720 1721 86001-86044 / 86044 show all
raldana-dualsentieon	SNP	ti	*	*	99.9357	99.9205	99.9510	17.0225	2083853	1658	2083794	1022	54	5.2838
hfeng-pmm1	SNP	ti	*	*	99.9548	99.9307	99.9789	16.7547	2084065	1446	2084007	440	67	15.2273
hfeng-pmm2	SNP	ti	*	*	99.9484	99.9340	99.9629	17.4396	2084135	1376	2084077	774	72	9.3023
jlack-gatk	SNP	ti	*	*	99.7777	99.9393	99.6165	21.7408	2084246	1265	2084182	8024	364	4.5364
hfeng-pmm3	SNP	ti	*	*	99.9596	99.9417	99.9775	17.0194	2084295	1216	2084236	469	46	9.8081
rpoplin-dv42	SNP	ti	*	*	99.9621	99.9459	99.9782	17.6958	2084383	1128	2084320	454	276	60.7930
dgrover-gatk	SNP	ti	*	*	99.9570	99.9639	99.9500	17.7617	2084759	752	2084696	1042	126	12.0921
jli-custom	SNP	ti	*	*	99.9536	99.9637	99.9435	16.8976	2084755	756	2084716	1179	130	11.0263
bgallagher-sentieon	SNP	ti	*	*	99.9476	99.9680	99.9272	17.4519	2084844	667	2084781	1519	117	7.7024
ckim-dragen	SNP	ti	*	*	99.8327	99.9538	99.7120	20.2602	2084547	964	2084816	6022	378	6.2770
ckim-isaac	SNP	*	*	*	98.5357	97.1616	99.9494	15.9907	2967930	86704	2968584	1504	880	58.5106
anovak-vg	SNP	*	*	*	98.4545	98.3357	98.5736	21.3437	3003796	50838	2987348	43227	18700	43.2600
asubramanian-gatk	SNP	*	*	*	98.9379	97.9985	99.8954	21.0150	2993480	61139	2993343	3133	150	4.7877
gduggal-bwaplat	SNP	*	*	*	98.8646	98.0471	99.6958	26.6546	2994965	59654	2995523	9139	1314	14.3779
eyeh-varpipe	SNP	*	*	*	99.4670	99.9638	98.9751	20.3427	3053527	1107	2999712	31063	471	1.5163
mlin-fermikit	SNP	*	*	*	98.8629	98.2311	99.5029	16.3803	3000602	54032	3000527	14990	12200	81.3876
gduggal-snapvard	SNP	*	*	*	99.0871	98.9341	99.2406	23.7872	3022073	32560	3000636	22962	3691	16.0744
gduggal-bwavard	SNP	*	*	*	99.3249	99.0431	99.6083	22.9016	3025405	29229	3004827	11817	3477	29.4237
ciseli-custom	SNP	*	*	*	97.7648	98.8356	96.7169	21.5138	3019065	35569	3006072	102041	11838	11.6012
qzeng-custom	SNP	*	*	*	99.4966	99.2413	99.7533	22.5407	3031458	23176	3012983	7452	1530	20.5314
ckim-vqsr	SNP	*	*	*	99.2866	98.6511	99.9303	23.6837	3013415	41204	3013272	2101	144	6.8539
gduggal-snapplat	SNP	*	*	*	99.0030	98.6815	99.3266	26.8746	3014360	40274	3015151	20442	2819	13.7902
astatham-gatk	SNP	*	*	*	99.5934	99.2091	99.9807	19.0428	3030461	24158	3030315	584	162	27.7397
jmaeng-gatk	SNP	*	*	*	99.6144	99.4608	99.7686	23.7289	3038147	16472	3038001	7046	253	3.5907
ckim-gatk	SNP	*	*	*	99.6466	99.4788	99.8150	23.5123	3038698	15921	3038552	5632	250	4.4389
jpowers-varprowl	SNP	*	*	*	99.5004	99.5447	99.4561	23.3348	3040706	13908	3041157	16632	2670	16.0534
ndellapenna-hhga	SNP	*	*	*	99.8818	99.8118	99.9519	18.1821	3048871	5748	3048919	1468	467	31.8120
gduggal-snapfb	SNP	*	*	*	99.2501	99.8026	98.7037	23.6262	3048604	6030	3049548	40049	2047	5.1112
cchapple-custom	SNP	*	*	*	99.8448	99.8832	99.8063	20.8246	3051052	3567	3049557	5917	726	12.2697
egarrison-hhga	SNP	*	*	*	99.8985	99.8365	99.9607	18.3304	3049624	4995	3049677	1199	305	25.4379
gduggal-bwafb	SNP	*	*	*	99.7820	99.8619	99.7021	21.9848	3050417	4217	3050656	9115	775	8.5025
ghariani-varprowl	SNP	*	*	*	99.3496	99.8685	98.8361	25.2137	3050577	4016	3051086	35930	2639	7.3448
ltrigg-rtg1	SNP	*	*	*	99.8754	99.8921	99.8587	17.5113	3051330	3296	3051518	4317	267	6.1849
ltrigg-rtg2	SNP	*	*	*	99.8749	99.8935	99.8562	17.0058	3051374	3252	3051531	4395	283	6.4391
raldana-dualsentieon	SNP	*	*	*	99.9260	99.9131	99.9389	18.4181	3051965	2654	3051826	1867	97	5.1955
hfeng-pmm1	SNP	*	*	*	99.9496	99.9227	99.9766	18.0950	3052257	2362	3052118	715	107	14.9650
hfeng-pmm2	SNP	*	*	*	99.9416	99.9254	99.9579	18.8175	3052339	2280	3052202	1287	114	8.8578
hfeng-pmm3	SNP	*	*	*	99.9548	99.9339	99.9756	18.3516	3052601	2018	3052460	744	76	10.2151
jlack-gatk	SNP	*	*	*	99.7200	99.9393	99.5016	23.6335	3052765	1854	3052612	15290	548	3.5840
rpoplin-dv42	SNP	*	*	*	99.9587	99.9447	99.9728	19.0681	3052930	1689	3052766	832	433	52.0433
jli-custom	SNP	*	*	*	99.9382	99.9603	99.9160	18.2994	3053407	1212	3053302	2566	212	8.2619
dgrover-gatk	SNP	*	*	*	99.9456	99.9631	99.9282	19.2565	3053492	1127	3053343	2195	207	9.4305
bgallagher-sentieon	SNP	*	*	*	99.9296	99.9673	99.8919	18.9151	3053620	999	3053471	3303	195	5.9037
ckim-dragen	SNP	*	*	*	99.8268	99.9524	99.7015	21.8489	3053166	1453	3053731	9143	533	5.8296

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