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Explore HG002 comparison results
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EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TP Query FPFP gt% FP ma
85801-85850 / 86044 show all
rpoplin-dv42SNP*HG002complexvar*
99.9179
99.8694
99.9664
18.9545
753396985753221253214
84.5850
jlack-gatkSNP*HG002complexvar*
99.9118
99.8944
99.9292
19.3948
753584797753425534201
37.6404
jli-customSNP*HG002complexvar*
99.9396
99.9065
99.9727
19.0201
75367670575356520691
44.1748
dgrover-gatkSNP*HG002complexvar*
99.9517
99.9260
99.9773
19.0606
75382355875366817188
51.4620
bgallagher-sentieonSNP*HG002complexvar*
99.9538
99.9332
99.9744
19.0217
75387750475372219384
43.5233
ckim-dragenSNP*HG002complexvar*
99.9301
99.9223
99.9379
19.4552
753795586754278469236
50.3198
ckim-isaacSNPti*homalt
98.4855
97.0214
99.9944
13.4256
779120239197791534432
72.7273
asubramanian-gatkSNPti*homalt
98.9721
97.9680
99.9969
16.0441
786720163187867112422
91.6667
ckim-vqsrSNPti*homalt
99.0608
98.1423
99.9967
16.3042
788120149187881112625
96.1538
gduggal-bwaplatSNPti*homalt
99.0843
98.2012
99.9834
17.0820
78859314445788346131112
85.4962
anovak-vgSNPti*homalt
99.1281
98.7623
99.4967
15.3503
793100993979009739973582
89.6172
eyeh-varpipeSNPti*homalt
99.9720
99.9710
99.9731
16.3629
80280623379029721389
41.7840
gduggal-snapvardSNPti*homalt
99.4493
98.9663
99.9370
16.0694
7947388301790421498326
65.4618
gduggal-bwavardSNPti*homalt
99.5201
99.0724
99.9718
15.7269
7955907449791466223186
83.4081
qzeng-customSNPti*homalt
99.6207
99.3383
99.9047
15.9860
7977255314792891756473
62.5661
gduggal-snapplatSNPti*homalt
99.4971
99.0644
99.9337
17.3977
7955267513795327528217
41.0985
mlin-fermikitSNPti*homalt
99.0118
99.0588
98.9648
15.5441
795481755879550283218052
96.7672
ckim-gatkSNPti*homalt
99.6240
99.2571
99.9936
16.1503
79707259667970635133
64.7059
jmaeng-gatkSNPti*homalt
99.6264
99.2642
99.9912
16.0789
79712959097971207046
65.7143
ciseli-customSNPti*homalt
98.8778
99.5909
98.1749
17.4213
7997543285797240148217334
49.4838
gduggal-snapfbSNPti*homalt
99.7832
99.8062
99.7602
19.1162
80148315568015321927269
13.9595
cchapple-customSNPti*homalt
99.9468
99.8984
99.9953
15.1867
8022228168015523834
89.4737
gduggal-bwafbSNPti*homalt
99.9234
99.8676
99.9793
17.0184
8019761063801993166111
66.8675
ndellapenna-hhgaSNPti*homalt
99.9286
99.8893
99.9678
16.7330
802149889802170258209
81.0078
egarrison-hhgaSNPti*homalt
99.9365
99.8935
99.9794
16.8582
802183855802203165113
68.4848
ltrigg-rtg1SNPti*homalt
99.9664
99.9474
99.9854
16.2302
802614422802519117112
95.7265
ltrigg-rtg2SNPti*homalt
99.9701
99.9529
99.9873
15.8538
80265837880255410298
96.0784
jlack-gatkSNPti*homalt
99.9698
99.9522
99.9874
15.9699
80265438480264410166
65.3465
astatham-gatkSNPti*homalt
99.9764
99.9582
99.9946
15.8604
8027023368026934341
95.3488
ckim-dragenSNPti*homalt
99.9710
99.9493
99.9928
15.7227
8026314078027385851
87.9310
ghariani-varprowlSNPti*homalt
99.8530
99.9608
99.7455
17.9110
80272031580276920481014
49.5117
jpowers-varprowlSNPti*homalt
99.8713
99.9620
99.7807
18.3988
80273330580278417641014
57.4830
rpoplin-dv42SNPti*homalt
99.9800
99.9747
99.9853
16.8487
802835203802832118106
89.8305
dgrover-gatkSNPti*homalt
99.9851
99.9756
99.9946
15.9219
8028421968028334339
90.6977
bgallagher-sentieonSNPti*homalt
99.9867
99.9791
99.9944
15.8584
8028701688028614541
91.1111
jli-customSNPti*homalt
99.9866
99.9797
99.9934
15.9268
8028751638028705342
79.2453
raldana-dualsentieonSNPti*homalt
99.9899
99.9839
99.9959
15.7711
8029091298029013332
96.9697
hfeng-pmm2SNPti*homalt
99.9915
99.9903
99.9927
16.7561
802960788029525948
81.3559
hfeng-pmm3SNPti*homalt
99.9929
99.9905
99.9953
16.6242
802962768029533827
71.0526
hfeng-pmm1SNPti*homalt
99.9926
99.9908
99.9944
16.6970
802964748029574535
77.7778
ckim-isaacSNPtv**
98.3371
96.7926
99.9317
18.3312
93859631102938905642418
65.1090
gduggal-bwaplatSNPtv**
98.5599
97.4574
99.6876
31.4101
945035246559452542962440
14.8548
asubramanian-gatkSNPtv**
98.7904
97.7276
99.8765
24.3508
94765522035947577117261
5.2048
mlin-fermikitSNPtv**
98.7665
98.1308
99.4104
19.3147
9515721812695150656434116
72.9399
anovak-vgSNPtv**
98.3366
98.3717
98.3016
24.5602
95390815790951566164416526
39.6934
gduggal-snapplatSNPtv**
98.6169
98.1754
99.0623
31.7051
9520051769395236890151026
11.3810
gduggal-snapvardSNPtv**
98.9298
98.8902
98.9694
27.3396
9589361076295395999341577
15.8748
ckim-vqsrSNPtv**
99.1585
98.4420
99.8855
27.4583
95458215108954496109457
5.2102
ciseli-customSNPtv**
96.5740
98.6920
94.5451
25.2127
95701412684954909550954019
7.2947
gduggal-bwavardSNPtv**
99.2324
99.0032
99.4627
26.1679
960032966695530951611540
29.8392