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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1706 1707 1708 1709 1710 1711 1712 1713 1714 ... 1720 1721 » 85451-85500 / 86044 show all
gduggal-bwavard	INDEL	*	*	het	89.1538	98.0771	81.7188	63.1804	190400	3733	190127	42533	38764	91.1386
gduggal-snapplat	SNP	ti	HG002complexvar	homalt	99.0919	98.3790	99.8152	19.4474	190328	3136	190130	352	203	57.6705
mlin-fermikit	SNP	ti	HG002complexvar	homalt	98.3813	98.4958	98.2669	18.8239	190554	2910	190572	3361	3261	97.0247
ltrigg-rtg1	INDEL	*	*	het	99.1142	98.5886	99.6455	55.1307	191393	2740	190584	678	162	23.8938
ckim-gatk	SNP	ti	HG002complexvar	homalt	99.3341	98.6902	99.9864	18.4846	190929	2534	190919	26	23	88.4615
jmaeng-gatk	SNP	ti	HG002complexvar	homalt	99.3419	98.7072	99.9848	18.4737	190962	2501	190952	29	26	89.6552
asubramanian-gatk	INDEL	*	*	het	98.9698	98.6849	99.2562	61.7813	191580	2553	191238	1433	589	41.1026
ghariani-varprowl	INDEL	*	*	het	89.6326	98.5731	82.1789	64.2989	191361	2770	191449	41517	38150	91.8901
ltrigg-rtg2	INDEL	*	*	het	99.3348	99.1568	99.5135	56.1055	192496	1637	191657	937	230	24.5464
raldana-dualsentieon	INDEL	*	*	het	99.3035	99.0228	99.5858	57.9096	192236	1897	191867	798	611	76.5664
hfeng-pmm2	INDEL	*	*	het	99.3911	99.1521	99.6313	58.9414	192487	1646	192126	711	412	57.9466
cchapple-custom	SNP	ti	HG002complexvar	homalt	99.8348	99.6852	99.9849	17.4009	192854	609	192184	29	25	86.2069
hfeng-pmm3	INDEL	*	*	het	99.4705	99.1923	99.7504	58.0356	192565	1568	192191	481	313	65.0728
hfeng-pmm1	INDEL	*	*	het	99.4245	99.1923	99.6578	58.3471	192565	1568	192194	660	374	56.6667
jli-custom	INDEL	*	*	het	99.5119	99.3015	99.7232	58.0133	192777	1356	192389	534	340	63.6704
jlack-gatk	INDEL	*	*	het	98.8624	99.4076	98.3232	61.7242	192983	1150	192623	3285	1088	33.1202
rpoplin-dv42	INDEL	*	*	het	99.0459	99.3340	98.7595	59.2937	192840	1293	192749	2421	2250	92.9368
jmaeng-gatk	INDEL	*	*	het	99.3015	99.4880	99.1156	62.5254	193139	994	192770	1720	614	35.6977
astatham-gatk	INDEL	*	*	het	99.5127	99.4973	99.5281	60.7701	193157	976	192779	914	573	62.6915
ckim-vqsr	INDEL	*	*	het	99.5204	99.5086	99.5323	62.3713	193179	954	192796	906	561	61.9205
ckim-dragen	INDEL	*	*	het	99.4503	99.5962	99.3048	61.2221	193349	784	192841	1350	335	24.8148
gduggal-snapfb	SNP	ti	HG002complexvar	homalt	99.6542	99.7054	99.6030	19.3776	192894	570	192940	769	240	31.2094
ltrigg-rtg1	SNP	ti	HG002complexvar	homalt	99.9028	99.8341	99.9715	18.2456	193142	321	193049	55	54	98.1818
bgallagher-sentieon	INDEL	*	*	het	99.5620	99.6441	99.4801	60.4341	193442	691	193072	1009	623	61.7443
dgrover-gatk	INDEL	*	*	het	99.5990	99.6559	99.5422	61.2168	193465	668	193091	888	555	62.5000
ckim-gatk	INDEL	*	*	het	99.4669	99.6616	99.2730	62.2737	193476	657	193095	1414	578	40.8769
ltrigg-rtg2	SNP	ti	HG002complexvar	homalt	99.9240	99.8739	99.9741	18.1301	193219	244	193117	50	49	98.0000
gduggal-bwafb	SNP	ti	HG002complexvar	homalt	99.8904	99.8351	99.9457	18.2578	193145	319	193159	105	88	83.8095
ndellapenna-hhga	SNP	ti	HG002complexvar	homalt	99.8705	99.8403	99.9007	18.4130	193154	309	193175	192	171	89.0625
egarrison-hhga	INDEL	*	*	het	97.8735	98.9564	96.8141	57.0135	192107	2026	193181	6357	5653	88.9256
egarrison-hhga	SNP	ti	HG002complexvar	homalt	99.8937	99.8480	99.9395	18.4037	193169	294	193188	117	94	80.3419
jlack-gatk	SNP	ti	HG002complexvar	homalt	99.9491	99.9163	99.9819	18.2375	193301	162	193290	35	32	91.4286
astatham-gatk	SNP	ti	HG002complexvar	homalt	99.9545	99.9214	99.9876	18.3169	193311	152	193301	24	24	100.0000
ndellapenna-hhga	INDEL	*	*	het	97.8590	98.8060	96.9301	56.3967	191815	2318	193328	6123	5425	88.6004
dgrover-gatk	SNP	ti	HG002complexvar	homalt	99.9661	99.9447	99.9876	18.3249	193356	107	193346	24	24	100.0000
jli-custom	SNP	ti	HG002complexvar	homalt	99.9648	99.9478	99.9819	18.3860	193362	101	193356	35	26	74.2857
bgallagher-sentieon	SNP	ti	HG002complexvar	homalt	99.9695	99.9514	99.9876	18.3190	193369	94	193359	24	24	100.0000
rpoplin-dv42	SNP	ti	HG002complexvar	homalt	99.9574	99.9530	99.9617	18.4113	193372	91	193367	74	72	97.2973
raldana-dualsentieon	SNP	ti	HG002complexvar	homalt	99.9811	99.9726	99.9897	18.3281	193410	53	193401	20	20	100.0000
ghariani-varprowl	SNP	ti	HG002complexvar	homalt	99.7133	99.9473	99.4805	19.5938	193359	102	193405	1010	705	69.8020
hfeng-pmm2	SNP	ti	HG002complexvar	homalt	99.9798	99.9757	99.9840	18.5051	193416	47	193407	31	31	100.0000
hfeng-pmm3	SNP	ti	HG002complexvar	homalt	99.9848	99.9773	99.9922	18.4374	193419	44	193409	15	15	100.0000
jpowers-varprowl	SNP	ti	HG002complexvar	homalt	99.7216	99.9488	99.4954	19.7390	193364	99	193412	981	709	72.2732
hfeng-pmm1	SNP	ti	HG002complexvar	homalt	99.9845	99.9798	99.9891	18.4732	193424	39	193416	21	21	100.0000
ckim-dragen	SNP	ti	HG002complexvar	homalt	99.9527	99.9214	99.9840	18.3095	193311	152	193417	31	31	100.0000
gduggal-snapfb	INDEL	*	*	het	92.8434	92.0858	93.6136	55.1298	178769	15364	200114	13652	5023	36.7931
gduggal-bwafb	INDEL	*	*	het	97.2465	95.6571	98.8897	54.7010	185702	8431	212773	2389	1710	71.5781
qzeng-custom	INDEL	*	*	het	97.1762	98.2811	96.0960	58.8639	190796	3337	217691	8844	3946	44.6178
ckim-isaac	SNP	tv	HG002complexvar	*	95.4727	91.5159	99.7871	19.3101	225271	20884	225437	481	401	83.3680
gduggal-snapvard	INDEL	*	*	het	84.4835	93.2561	77.2195	60.6809	181038	13092	228131	67301	50370	74.8429

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