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Explore HG002 comparison results
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EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TP Query FPFP gt% FP ma
85351-85400 / 86044 show all
mlin-fermikitSNPtvHG002complexvarhet
98.0988
96.3081
99.9573
20.3091
1451695565145103629
14.5161
ltrigg-rtg1SNP*map_siren*
99.4858
99.2395
99.7333
50.0979
145115111214510838849
12.6289
asubramanian-gatkINDELD1_5**
99.2637
98.9281
99.6016
61.0980
1451721573145253581383
65.9208
ghariani-varprowlSNP*map_siren*
98.7774
99.3373
98.2237
61.6367
1452599691452632627430
16.3685
jlack-gatkSNP*map_siren*
98.0143
99.3920
96.6743
64.0744
1453398891453164999358
7.1614
asubramanian-gatkSNPtvHG002complexvarhet
98.1875
96.4619
99.9759
22.1458
14539853331453293510
28.5714
gduggal-bwafbSNP*map_siren*
99.2387
99.3893
99.0885
58.6242
1453358931453391337225
16.8287
egarrison-hhgaSNP*map_siren*
99.6583
99.4385
99.8791
53.8224
14540782114540817678
44.3182
ltrigg-rtg2INDELD1_5**
99.4769
99.2395
99.7155
55.7210
1456291116145463415145
34.9398
rpoplin-dv42SNP*map_siren*
99.6224
99.5097
99.7354
54.5067
145511717145497386225
58.2902
raldana-dualsentieonINDELD1_5**
99.4299
99.1168
99.7450
58.6151
1454491296145501372312
83.8710
jlack-gatkINDELD1_5**
99.0320
99.1134
98.9507
60.1218
14544413011455021543552
35.7745
gduggal-snapfbINDELI1_5**
94.6996
95.8769
93.5508
58.0186
1444526212145507100313046
30.3659
ckim-dragenSNP*map_siren*
98.9989
99.5042
98.4987
58.4236
1455037251455172218229
10.3246
gduggal-snapplatSNPtvHG002complexvarhet
96.9038
96.2928
97.5225
28.0304
14514655881455273697526
14.2278
cchapple-customINDELD1_5**
99.4223
99.1584
99.6877
55.8052
1455101235145535456300
65.7895
hfeng-pmm3INDELD1_5**
99.5137
99.1441
99.8861
56.7122
1454891256145542166109
65.6627
hfeng-pmm1INDELD1_5**
99.5052
99.1482
99.8648
57.2252
1454951250145547197112
56.8528
hfeng-pmm1SNP*map_siren*
99.7072
99.5541
99.8607
53.5315
14557665214555620364
31.5271
hfeng-pmm2INDELD1_5**
99.4930
99.1557
99.8326
57.8117
1455061239145558244146
59.8361
raldana-dualsentieonSNP*map_siren*
99.5640
99.5698
99.5582
54.3006
14559962914557664630
4.6440
jli-customSNP*map_siren*
99.6458
99.5726
99.7192
52.4710
145603625145591410101
24.6341
dgrover-gatkSNP*map_siren*
99.6607
99.6410
99.6805
56.6949
145703525145680467103
22.0557
hfeng-pmm2SNP*map_siren*
99.6789
99.6758
99.6819
56.1450
14575447414573146562
13.3333
bgallagher-sentieonSNP*map_siren*
99.5992
99.6902
99.5084
55.5562
145775453145752720102
14.1667
hfeng-pmm3SNP*map_siren*
99.7673
99.6957
99.8390
54.1028
14578344514576023540
17.0213
rpoplin-dv42INDELD1_5**
99.4429
99.3110
99.5751
58.2332
1457341011145779622549
88.2637
jmaeng-gatkINDELD1_5**
99.3810
99.3322
99.4300
61.6387
145765980145820836338
40.4306
ckim-dragenINDELD1_5**
99.4199
99.4105
99.4294
60.9956
145880865145840837396
47.3118
ckim-vqsrINDELD1_5**
99.5124
99.3485
99.6767
61.5493
145789956145843473318
67.2304
qzeng-customINDELI1_5**
97.7958
96.8327
98.7782
55.3353
145892477214585018041184
65.6319
ckim-gatkINDELD1_5**
99.4755
99.4262
99.5247
61.4945
145903842145958697326
46.7719
astatham-gatkINDELD1_5**
99.5682
99.4433
99.6934
60.4898
145928817145983449317
70.6013
bgallagher-sentieonINDELD1_5**
99.5437
99.4494
99.6383
60.2111
145937808145993530397
74.9057
jli-customINDELD1_5**
99.6468
99.4746
99.8195
58.9401
145974771146018264201
76.1364
dgrover-gatkINDELD1_5**
99.6144
99.5271
99.7018
60.8244
146051694146107437317
72.5400
astatham-gatkSNPtvHG002complexvarhet
98.5778
97.2116
99.9829
21.9634
14652842031464562511
44.0000
gduggal-bwafbINDELI1_5**
97.8814
96.8991
98.8838
56.3942
145992467214678916571400
84.4900
qzeng-customSNPtvHG002complexvarhet
99.0228
98.2997
99.7567
23.1864
1481712563146790358101
28.2123
ckim-vqsrSNPtvHG002complexvarhet
98.9859
98.0150
99.9763
22.4456
14773929921476623514
40.0000
ltrigg-rtg1INDELI1_5**
99.3139
98.8385
99.7940
55.2555
1489131750148225306127
41.5033
qzeng-customINDEL*lowcmp_AllRepeats_lt51bp_gt95identity_merged*
95.6668
95.6114
95.7223
68.1753
90304414514827166263965
59.8400
asubramanian-gatkINDELI1_5**
99.0996
98.6108
99.5933
59.2515
1485712093148648607454
74.7941
ltrigg-rtg2INDELI1_5**
99.5218
99.3203
99.7241
55.5467
1496391024148928412159
38.5922
ndellapenna-hhgaINDELI1_5**
99.2393
98.9360
99.5445
55.9242
1490611603149032682431
63.1965
raldana-dualsentieonINDELI1_5**
99.2891
98.9095
99.6717
56.6470
1490211643149065491422
85.9470
jlack-gatkINDELI1_5**
99.0273
98.9407
99.1140
59.6345
14906815961491191333677
50.7877
jpowers-varprowlSNPtvHG002complexvarhet
99.3313
98.8748
99.7919
23.6187
149035169614915531160
19.2926
rpoplin-dv42INDELI1_5**
99.2493
99.0230
99.4767
57.6844
1491921472149236785730
92.9936
egarrison-hhgaINDELI1_5**
99.2965
99.0761
99.5179
56.5802
1492721392149236723442
61.1342