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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1690 1691 1692 1693 1694 1695 1696 1697 1698 ... 1720 1721 » 84651-84700 / 86044 show all
ltrigg-rtg1	INDEL	D1_5	*	homalt	99.7747	99.5851	99.9650	56.3253	48723	203	48596	17	16	94.1176
egarrison-hhga	SNP	ti	map_l100_m2_e0	*	99.5647	99.2770	99.8541	64.5210	48607	354	48608	71	32	45.0704
rpoplin-dv42	SNP	ti	map_l100_m2_e0	*	99.4660	99.2933	99.6392	64.7198	48615	346	48608	176	120	68.1818
gduggal-bwafb	INDEL	D1_5	*	homalt	98.9426	99.3562	98.5324	61.7935	48611	315	48609	724	697	96.2707
ckim-dragen	SNP	ti	map_l100_m2_e0	*	98.6738	99.2954	98.0599	68.9474	48616	345	48624	962	107	11.1227
jli-custom	SNP	ti	map_l100_m2_e0	*	99.4978	99.3362	99.6598	62.5143	48636	325	48634	166	50	30.1205
raldana-dualsentieon	SNP	ti	map_l100_m2_e0	*	99.3403	99.3525	99.3281	64.7470	48644	317	48637	329	19	5.7751
hfeng-pmm1	SNP	ti	map_l100_m2_e0	*	99.5722	99.3566	99.7887	64.0145	48646	315	48639	103	32	31.0680
dgrover-gatk	SNP	ti	map_l100_m2_e0	*	99.5249	99.4730	99.5767	67.5957	48703	258	48696	207	50	24.1546
hfeng-pmm2	SNP	ti	map_l100_m2_e0	*	99.5384	99.5445	99.5323	66.9341	48738	223	48731	229	30	13.1004
bgallagher-sentieon	SNP	ti	map_l100_m2_e0	*	99.4612	99.5466	99.3760	66.3096	48739	222	48732	306	50	16.3399
ckim-isaac	SNP	*	map_l100_m2_e1	*	78.8815	65.2060	99.8157	65.2814	48733	26004	48740	90	22	24.4444
hfeng-pmm3	SNP	ti	map_l100_m2_e0	*	99.6760	99.5874	99.7647	64.5930	48759	202	48752	115	21	18.2609
rpoplin-dv42	INDEL	D1_5	*	homalt	99.7606	99.6505	99.8710	59.0122	48755	171	48760	63	56	88.8889
eyeh-varpipe	INDEL	*	lowcmp_SimpleRepeat_diTR_11to50	*	79.8081	77.9624	81.7434	39.7623	28528	8064	48773	10893	10778	98.9443
asubramanian-gatk	INDEL	D1_5	*	homalt	99.6476	99.6668	99.6283	62.3701	48763	163	48779	182	169	92.8571
ltrigg-rtg2	SNP	ti	map_l100_m2_e1	*	99.2480	98.6784	99.8242	55.9018	48831	654	48833	86	19	22.0930
ckim-dragen	INDEL	D1_5	*	homalt	99.6542	99.8998	99.4098	63.4062	48877	49	48847	290	286	98.6207
hfeng-pmm2	INDEL	D1_5	*	homalt	99.8457	99.8467	99.8447	59.0004	48851	75	48855	76	74	97.3684
hfeng-pmm1	INDEL	D1_5	*	homalt	99.8651	99.8549	99.8753	58.6796	48855	71	48859	61	60	98.3607
jlack-gatk	INDEL	D1_5	*	homalt	99.6645	99.8651	99.4647	59.9060	48860	66	48867	263	260	98.8593
hfeng-pmm3	INDEL	D1_5	*	homalt	99.8825	99.8835	99.8815	58.1721	48869	57	48874	58	56	96.5517
ckim-vqsr	INDEL	D1_5	*	homalt	99.7969	99.9203	99.6738	62.4858	48887	39	48894	160	157	98.1250
jmaeng-gatk	INDEL	D1_5	*	homalt	99.7928	99.9285	99.6576	62.5365	48891	35	48898	168	166	98.8095
ckim-gatk	INDEL	D1_5	*	homalt	99.8051	99.9366	99.6739	62.4819	48895	31	48902	160	157	98.1250
astatham-gatk	INDEL	D1_5	*	homalt	99.8143	99.9448	99.6841	62.4034	48899	27	48904	155	152	98.0645
raldana-dualsentieon	INDEL	D1_5	*	homalt	99.7919	99.9448	99.6394	61.4897	48899	27	48904	177	175	98.8701
jli-custom	INDEL	D1_5	*	homalt	99.8764	99.9428	99.8102	61.2620	48898	28	48904	93	90	96.7742
dgrover-gatk	INDEL	D1_5	*	homalt	99.8204	99.9489	99.6922	62.5668	48901	25	48906	151	149	98.6755
bgallagher-sentieon	INDEL	D1_5	*	homalt	99.7512	99.9530	99.5502	62.3527	48903	23	48908	221	219	99.0950
ltrigg-rtg1	SNP	ti	map_l100_m2_e1	*	99.3168	98.8481	99.7899	59.0336	48915	570	48917	103	29	28.1553
ndellapenna-hhga	SNP	ti	map_l100_m2_e1	*	99.3624	98.8906	99.8388	63.3822	48936	549	48938	79	40	50.6329
ghariani-varprowl	SNP	ti	map_l100_m2_e1	*	98.6004	99.0118	98.1924	70.8832	48996	489	48998	902	186	20.6208
gduggal-snapplat	INDEL	D1_5	*	homalt	88.9829	85.3881	92.8936	64.0746	41777	7149	49006	3749	2039	54.3878
cchapple-custom	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	97.1590	96.0055	98.3406	45.9292	36388	1514	49009	827	740	89.4800
jlack-gatk	SNP	ti	map_l100_m2_e1	*	97.5095	99.1108	95.9591	74.4631	49045	440	49038	2065	195	9.4431
gduggal-bwafb	SNP	ti	map_l100_m2_e1	*	99.1089	99.1189	99.0989	68.4487	49049	436	49051	446	108	24.2152
rpoplin-dv42	SNP	ti	map_l100_m2_e1	*	99.4666	99.2947	99.6390	64.7230	49136	349	49129	178	121	67.9775
egarrison-hhga	SNP	ti	map_l100_m2_e1	*	99.5683	99.2846	99.8537	64.5157	49131	354	49132	72	32	44.4444
ckim-dragen	SNP	ti	map_l100_m2_e1	*	98.6777	99.2968	98.0664	68.9837	49137	348	49145	969	108	11.1455
jli-custom	SNP	ti	map_l100_m2_e1	*	99.5011	99.3412	99.6614	62.5257	49159	326	49157	167	50	29.9401
raldana-dualsentieon	SNP	ti	map_l100_m2_e1	*	99.3433	99.3594	99.3272	64.7652	49168	317	49161	333	19	5.7057
hfeng-pmm1	SNP	ti	map_l100_m2_e1	*	99.5757	99.3634	99.7889	64.0077	49170	315	49163	104	32	30.7692
ckim-isaac	SNP	ti	map_siren	het	88.1134	78.8433	99.8538	52.2793	49184	13198	49191	72	6	8.3333
dgrover-gatk	SNP	ti	map_l100_m2_e1	*	99.5279	99.4766	99.5792	67.5880	49226	259	49219	208	50	24.0385
qzeng-custom	INDEL	*	HG002complexvar	het	97.8163	97.7928	97.8398	56.2530	45192	1020	49233	1087	393	36.1546
hfeng-pmm2	SNP	ti	map_l100_m2_e1	*	99.5423	99.5494	99.5352	66.9275	49262	223	49255	230	30	13.0435
bgallagher-sentieon	SNP	ti	map_l100_m2_e1	*	99.4649	99.5494	99.3806	66.3075	49262	223	49255	307	50	16.2866
eyeh-varpipe	INDEL	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	86.9712	95.7121	79.6933	69.9711	29442	1319	49260	12552	12425	98.9882
hfeng-pmm3	SNP	ti	map_l100_m2_e1	*	99.6774	99.5898	99.7651	64.5884	49282	203	49275	116	21	18.1034

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