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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1636 1637 1638 1639 1640 1641 1642 1643 1644 ... 1720 1721 » 81951-82000 / 86044 show all
jli-custom	SNP	*	func_cds	*	99.9036	99.9559	99.8514	23.3699	18142	8	18142	27	0	0.0000
cchapple-custom	SNP	*	func_cds	*	99.7855	99.9174	99.6539	26.7611	18135	15	18142	63	1	1.5873
ndellapenna-hhga	SNP	*	func_cds	*	99.9367	99.9614	99.9119	23.5700	18143	7	18143	16	0	0.0000
gduggal-snapfb	SNP	*	func_cds	*	99.6978	99.9614	99.4355	28.3431	18143	7	18143	103	2	1.9418
hfeng-pmm2	SNP	*	func_cds	*	99.9174	99.9780	99.8569	24.2548	18146	4	18143	26	0	0.0000
ckim-dragen	SNP	*	func_cds	*	99.5474	99.9669	99.1313	30.5099	18144	6	18144	159	1	0.6289
ltrigg-rtg1	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	*	99.3427	99.6095	99.0772	37.9144	18112	71	18145	169	3	1.7752
egarrison-hhga	SNP	*	func_cds	*	99.9477	99.9725	99.9229	23.9159	18145	5	18145	14	0	0.0000
anovak-vg	SNP	*	map_l150_m2_e1	het	76.0838	90.1144	65.8336	81.6880	18350	2013	18149	9419	2135	22.6669
jlack-gatk	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	*	98.2808	99.8350	96.7742	42.6049	18153	30	18150	605	8	1.3223
rpoplin-dv42	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	*	99.8707	99.8790	99.8625	38.9762	18161	22	18154	25	8	32.0000
egarrison-hhga	INDEL	*	*	hetalt	84.7197	74.1293	98.8404	62.3270	18708	6529	18156	213	191	89.6714
bgallagher-sentieon	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	*	99.1348	99.8900	98.3909	39.6771	18163	20	18160	297	4	1.3468
dgrover-gatk	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	*	99.3002	99.9010	98.7065	40.6968	18165	18	18162	238	4	1.6807
jli-custom	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	*	99.2134	99.9065	98.5299	39.2599	18166	17	18163	271	4	1.4760
gduggal-bwafb	SNP	ti	map_l100_m2_e0	homalt	99.5892	99.2954	99.8846	63.9034	18180	129	18180	21	13	61.9048
ckim-dragen	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	*	99.7859	99.8680	99.7039	39.7224	18159	24	18186	54	6	11.1111
cchapple-custom	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	*	99.0953	99.8075	98.3931	40.1515	18148	35	18186	297	10	3.3670
astatham-gatk	SNP	ti	map_l100_m2_e0	homalt	99.6302	99.3391	99.9231	59.5727	18188	121	18188	14	13	92.8571
ckim-dragen	SNP	ti	map_l100_m2_e0	homalt	99.6194	99.3610	99.8792	57.3994	18192	117	18197	22	20	90.9091
jpowers-varprowl	SNP	ti	map_l125_m2_e0	het	96.9503	96.4187	97.4878	78.3661	18200	676	18200	469	150	31.9829
mlin-fermikit	SNP	*	map_l100_m1_e0	homalt	73.8610	67.4221	81.6596	48.7624	18206	8797	18206	4089	3913	95.6958
dgrover-gatk	SNP	ti	map_l100_m2_e0	homalt	99.7264	99.5248	99.9287	59.9046	18222	87	18222	13	11	84.6154
gduggal-bwafb	INDEL	I1_5	HG002complexvar	het	97.6126	96.2835	98.9789	54.8150	17513	676	18224	188	155	82.4468
rpoplin-dv42	SNP	ti	map_l100_m2_e0	homalt	99.6664	99.5412	99.7919	62.9736	18225	84	18226	38	36	94.7368
gduggal-bwaplat	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	90.4913	83.3097	99.0278	77.4266	18244	3655	18233	179	151	84.3575
jli-custom	SNP	ti	map_l100_m2_e0	homalt	99.8004	99.6614	99.9398	59.0453	18247	62	18247	11	11	100.0000
bgallagher-sentieon	SNP	ti	map_l100_m2_e0	homalt	99.7949	99.6668	99.9233	59.4718	18248	61	18248	14	12	85.7143
ltrigg-rtg2	SNP	ti	map_l100_m2_e0	homalt	99.8031	99.6778	99.9288	59.8461	18250	59	18249	13	13	100.0000
ndellapenna-hhga	SNP	ti	map_l100_m2_e0	homalt	99.7949	99.6723	99.9179	61.7916	18249	60	18249	15	15	100.0000
raldana-dualsentieon	SNP	ti	map_l100_m2_e0	homalt	99.8196	99.7105	99.9288	58.8267	18256	53	18256	13	12	92.3077
ltrigg-rtg1	SNP	ti	map_l100_m2_e0	homalt	99.8005	99.7214	99.8796	61.9278	18258	51	18258	22	22	100.0000
mlin-fermikit	INDEL	*	lowcmp_SimpleRepeat_quadTR_11to50	*	92.9005	92.0300	93.7875	53.5986	18279	1583	18267	1210	1145	94.6281
egarrison-hhga	SNP	ti	map_l100_m2_e0	homalt	99.8579	99.7870	99.9289	62.7872	18270	39	18270	13	13	100.0000
ckim-isaac	SNP	ti	map_l125_m2_e0	*	75.2532	60.4006	99.7925	72.3144	18276	11982	18276	38	7	18.4211
hfeng-pmm1	SNP	ti	map_l100_m2_e0	homalt	99.8607	99.8416	99.8798	62.5925	18280	29	18280	22	12	54.5455
hfeng-pmm3	SNP	ti	map_l100_m2_e0	homalt	99.8662	99.8525	99.8798	62.5049	18282	27	18282	22	12	54.5455
gduggal-snapvard	SNP	*	map_l125_m0_e0	*	90.5380	95.5326	86.0396	81.8589	18519	866	18286	2967	202	6.8082
hfeng-pmm2	SNP	ti	map_l100_m2_e0	homalt	99.8744	99.8798	99.8689	62.5825	18287	22	18287	24	14	58.3333
jlack-gatk	SNP	ti	map_l100_m2_e1	homalt	99.3913	98.8807	99.9071	60.0864	18287	207	18287	17	15	88.2353
gduggal-bwavard	SNP	ti	map_l125_m2_e0	het	94.6336	97.6319	91.8139	83.0438	18429	447	18293	1631	107	6.5604
gduggal-snapvard	SNP	ti	map_l125_m2_e1	het	91.7986	96.5945	87.4564	82.3224	18437	650	18295	2624	207	7.8887
ciseli-custom	INDEL	D1_5	HG002complexvar	het	87.0231	88.2917	85.7906	58.0288	18332	2431	18318	3034	650	21.4239
qzeng-custom	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_11to50	*	91.1226	86.4620	96.3144	38.7578	4956	776	18319	701	658	93.8659
ghariani-varprowl	SNP	ti	map_l100_m2_e1	homalt	99.4248	99.0700	99.7822	63.1662	18322	172	18322	40	28	70.0000
jpowers-varprowl	SNP	ti	map_l100_m2_e1	homalt	99.4410	99.0808	99.8039	64.9625	18324	170	18324	36	28	77.7778
gduggal-bwaplat	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	73.3800	60.1280	94.1249	85.4676	18327	12153	18328	1144	321	28.0594
gduggal-bwaplat	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	73.3800	60.1280	94.1249	85.4676	18327	12153	18328	1144	321	28.0594
anovak-vg	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	88.5672	91.1998	86.0824	76.7383	17856	1723	18339	2965	857	28.9039
anovak-vg	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	88.5672	91.1998	86.0824	76.7383	17856	1723	18339	2965	857	28.9039

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