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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1455 1456 1457 1458 1459 1460 1461 1462 1463 ... 1720 1721 » 72901-72950 / 86044 show all
hfeng-pmm2	SNP	ti	map_l250_m2_e0	het	98.4404	98.9244	97.9610	90.8174	3219	35	3219	67	7	10.4478
eyeh-varpipe	SNP	ti	map_l250_m2_e1	het	98.5825	99.2725	97.9021	91.2682	3275	24	3220	69	4	5.7971
gduggal-snapfb	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	85.7504	85.7485	85.7523	74.5958	3225	536	3220	535	212	39.6262
gduggal-snapfb	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	85.7504	85.7485	85.7523	74.5958	3225	536	3220	535	212	39.6262
gduggal-snapplat	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	84.9187	82.8004	87.1483	74.4451	3211	667	3221	475	17	3.5790
ghariani-varprowl	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	93.0759	98.6453	88.1018	77.5526	3204	44	3221	435	34	7.8161
jpowers-varprowl	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	96.7965	98.7069	94.9587	77.6519	3206	42	3221	171	34	19.8830
jlack-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	95.9795	98.7477	93.3623	66.3775	3233	41	3221	229	194	84.7162
bgallagher-sentieon	SNP	ti	map_l250_m2_e0	het	98.3066	99.0166	97.6068	90.7462	3222	32	3222	79	16	20.2532
jlack-gatk	INDEL	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	89.0056	80.5701	99.4139	40.3057	3081	743	3223	19	17	89.4737
ckim-isaac	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	92.8582	89.4839	96.4970	68.0383	3242	381	3223	117	42	35.8974
cchapple-custom	SNP	tv	segdup	homalt	99.8144	99.9074	99.7215	89.1707	3235	3	3223	9	9	100.0000
gduggal-bwafb	SNP	tv	segdup	homalt	99.6445	99.5368	99.7524	90.8111	3223	15	3223	8	8	100.0000
gduggal-bwaplat	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	90.0576	82.2478	99.5062	84.1820	3220	695	3224	16	14	87.5000
gduggal-snapplat	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	88.5191	81.9668	96.2101	86.7350	3209	706	3224	127	53	41.7323
ghariani-varprowl	SNP	ti	map_l250_m2_e1	het	95.1903	97.7872	92.7278	92.3245	3226	73	3226	253	51	20.1581
gduggal-bwafb	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	82.6406	75.4390	91.3622	46.4432	2964	965	3226	305	294	96.3934
gduggal-snapfb	SNP	tv	segdup	homalt	99.3840	99.6603	99.1093	91.8109	3227	11	3227	29	8	27.5862
ciseli-custom	INDEL	I6_15	*	het	44.4423	31.4363	75.8046	53.6729	3154	6879	3227	1030	925	89.8058
jli-custom	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	99.3229	99.3534	99.2923	66.7825	3227	21	3227	23	6	26.0870
ltrigg-rtg1	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	98.0184	98.3990	97.6407	68.5083	3196	52	3228	78	3	3.8462
qzeng-custom	INDEL	D1_5	map_siren	*	93.2868	89.0337	97.9666	83.5685	3142	387	3228	67	43	64.1791
gduggal-snapvard	INDEL	D6_15	HG002complexvar	*	66.6908	61.3353	73.0708	52.3301	3252	2050	3229	1190	878	73.7815
anovak-vg	SNP	tv	map_l150_m2_e1	homalt	87.3530	78.1084	99.0798	73.8866	3229	905	3230	30	23	76.6667
rpoplin-dv42	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	99.5532	99.4766	99.6299	68.0748	3231	17	3230	12	5	41.6667
rpoplin-dv42	SNP	tv	segdup	homalt	99.7378	99.8456	99.6302	90.4939	3233	5	3233	12	12	100.0000
qzeng-custom	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	97.6562	98.9840	96.3636	77.0001	3215	33	3233	122	9	7.3771
ndellapenna-hhga	SNP	tv	segdup	homalt	99.6917	99.8765	99.5077	90.2309	3234	4	3234	16	16	100.0000
ghariani-varprowl	SNP	tv	segdup	homalt	99.0657	99.8456	98.2979	91.0501	3233	5	3234	56	29	51.7857
egarrison-hhga	SNP	tv	segdup	homalt	99.7379	99.8765	99.5996	90.3915	3234	4	3234	13	13	100.0000
bgallagher-sentieon	SNP	tv	segdup	homalt	99.8611	99.9074	99.8149	89.4615	3235	3	3235	6	6	100.0000
hfeng-pmm2	SNP	tv	segdup	homalt	99.8919	99.9074	99.8765	90.2428	3235	3	3235	4	4	100.0000
jlack-gatk	SNP	tv	segdup	homalt	99.8611	99.9074	99.8149	89.7982	3235	3	3235	6	6	100.0000
ltrigg-rtg2	SNP	tv	segdup	homalt	99.6765	99.9382	99.4161	89.5171	3236	2	3235	19	19	100.0000
cchapple-custom	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	97.8248	96.2264	99.4772	49.0761	714	28	3235	17	15	88.2353
ltrigg-rtg1	SNP	tv	segdup	homalt	99.6765	99.9382	99.4161	89.9204	3236	2	3235	19	19	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	97.9872	99.1753	96.8273	68.0073	3247	27	3235	106	103	97.1698
jli-custom	SNP	tv	segdup	homalt	99.8611	99.9074	99.8149	89.3818	3235	3	3235	6	6	100.0000
jpowers-varprowl	SNP	tv	segdup	homalt	99.1421	99.9074	98.3886	91.4237	3235	3	3236	53	29	54.7170
hfeng-pmm3	SNP	tv	segdup	homalt	99.8920	99.9382	99.8457	90.1933	3236	2	3236	5	5	100.0000
hfeng-pmm1	SNP	tv	segdup	homalt	99.8765	99.9382	99.8149	90.2264	3236	2	3236	6	6	100.0000
dgrover-gatk	SNP	tv	segdup	homalt	99.8765	99.9382	99.8149	89.5365	3236	2	3236	6	6	100.0000
astatham-gatk	SNP	tv	segdup	homalt	99.8765	99.9382	99.8149	89.4470	3236	2	3236	6	6	100.0000
ciseli-custom	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	57.8173	89.4447	42.7138	55.6700	3254	384	3236	4340	4025	92.7419
raldana-dualsentieon	SNP	ti	map_l250_m2_e1	het	97.5433	98.0903	97.0024	89.5913	3236	63	3236	100	2	2.0000
raldana-dualsentieon	SNP	tv	segdup	homalt	99.8765	99.9382	99.8149	89.2756	3236	2	3236	6	6	100.0000
rpoplin-dv42	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	96.0400	99.0531	93.2047	66.1798	3243	31	3237	236	234	99.1525
gduggal-snapfb	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	52.1835	44.7148	62.6476	54.5878	2720	3363	3237	1930	985	51.0363
cchapple-custom	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	99.3846	99.2919	99.4776	66.9410	3225	23	3237	17	3	17.6471
ckim-dragen	SNP	tv	segdup	homalt	99.9074	99.9691	99.8458	89.2553	3237	1	3237	5	5	100.0000

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