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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1198 1199 1200 1201 1202 1203 1204 1205 1206 ... 1720 1721 » 60051-60100 / 86044 show all
gduggal-snapfb	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_11to50	het	69.4193	63.9344	75.9336	65.0725	312	176	366	116	104	89.6552
gduggal-snapfb	INDEL	D1_5	map_l125_m2_e1	homalt	98.3846	98.1183	98.6523	89.5962	365	7	366	5	3	60.0000
raldana-dualsentieon	INDEL	D1_5	map_l125_m2_e1	homalt	98.9189	98.3871	99.4565	84.6603	366	6	366	2	2	100.0000
rpoplin-dv42	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	99.4565	99.1870	99.7275	80.7349	366	3	366	1	1	100.0000
jmaeng-gatk	INDEL	D1_5	map_l125_m2_e1	homalt	98.9189	98.3871	99.4565	86.2224	366	6	366	2	2	100.0000
jmaeng-gatk	SNP	tv	map_l250_m1_e0	homalt	59.8528	42.7570	99.7275	93.2050	366	490	366	1	1	100.0000
hfeng-pmm3	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	96.4427	96.5699	96.3158	59.3148	366	13	366	14	14	100.0000
hfeng-pmm2	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	het	97.8334	96.0100	99.7275	78.6876	385	16	366	1	1	100.0000
ckim-dragen	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	99.8643	99.7290	100.0000	82.4038	368	1	366	0	0
cchapple-custom	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_11to50	het	99.1736	98.3607	100.0000	47.7208	120	2	367	0	0
ckim-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_51to200	het	97.8944	97.9221	97.8667	79.2359	377	8	367	8	7	87.5000
ghariani-varprowl	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	63.3305	56.2021	72.5296	71.5411	367	286	367	139	118	84.8921
ndellapenna-hhga	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	97.4803	98.6631	96.3255	58.8553	369	5	367	14	8	57.1429
gduggal-bwafb	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	99.1863	98.9160	99.4580	80.5789	365	4	367	2	2	100.0000
gduggal-bwafb	INDEL	D1_5	map_l125_m2_e1	homalt	99.0553	98.6559	99.4580	88.0078	367	5	367	2	2	100.0000
eyeh-varpipe	INDEL	D1_5	map_l100_m0_e0	homalt	97.1860	98.0620	96.3255	87.0584	253	5	367	14	10	71.4286
ckim-isaac	INDEL	I1_5	map_l125_m1_e0	het	85.6476	75.5144	98.9218	88.5352	367	119	367	4	1	25.0000
astatham-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_51to200	het	97.8944	97.9221	97.8667	79.3046	377	8	367	8	7	87.5000
jlack-gatk	INDEL	D1_5	map_l125_m2_e1	homalt	99.1892	98.6559	99.7283	85.0528	367	5	367	1	1	100.0000
jlack-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	96.1992	95.0777	97.3475	90.9113	367	19	367	10	7	70.0000
hfeng-pmm2	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	95.7829	92.3684	99.4595	64.7619	351	29	368	2	2	100.0000
hfeng-pmm3	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	het	97.9619	96.5087	99.4595	77.8443	387	14	368	2	2	100.0000
hfeng-pmm1	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	99.8643	99.7290	100.0000	80.4255	368	1	368	0	0
hfeng-pmm1	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	96.5879	97.0976	96.0836	58.4599	368	11	368	15	15	100.0000
dgrover-gatk	INDEL	D1_5	map_l125_m2_e1	homalt	99.1914	98.9247	99.4595	86.3921	368	4	368	2	2	100.0000
egarrison-hhga	INDEL	D1_5	map_l125_m2_e1	homalt	99.1914	98.9247	99.4595	86.5160	368	4	368	2	2	100.0000
egarrison-hhga	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	98.5303	98.9305	98.1333	57.4347	370	4	368	7	4	57.1429
cchapple-custom	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.1942	99.4652	98.9247	51.8135	372	2	368	4	3	75.0000
ckim-gatk	SNP	tv	map_l250_m1_e0	homalt	60.1307	42.9907	100.0000	93.6519	368	488	368	0	0
ghariani-varprowl	INDEL	D16_PLUS	HG002compoundhet	het	34.2987	89.1358	21.2349	37.1418	361	44	368	1365	1360	99.6337
gduggal-bwavard	INDEL	D6_15	map_siren	*	75.5000	73.4774	77.6371	87.1753	374	135	368	106	86	81.1321
gduggal-bwafb	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	76.5595	74.4422	78.8009	51.4553	367	126	368	99	99	100.0000
rpoplin-dv42	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.0579	98.3957	99.7290	58.9087	368	6	368	1	0	0.0000
raldana-dualsentieon	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	99.8647	100.0000	99.7297	81.5645	369	0	369	1	1	100.0000
gduggal-snapvard	INDEL	*	map_l125_m0_e0	homalt	92.1348	86.6197	98.4000	84.7437	246	38	369	6	4	66.6667
dgrover-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	81.9824	369	0	369	0	0
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	82.0525	369	0	369	0	0
ckim-vqsr	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	hetalt	82.7698	70.8758	99.4609	27.5391	348	143	369	2	2	100.0000
ckim-vqsr	INDEL	D1_5	map_l125_m2_e1	homalt	99.3271	99.1935	99.4609	86.4599	369	3	369	2	2	100.0000
ndellapenna-hhga	INDEL	D1_5	map_l125_m2_e1	homalt	99.0604	99.1935	98.9276	85.4807	369	3	369	4	4	100.0000
mlin-fermikit	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	*	82.7354	76.8750	89.5631	81.5825	369	111	369	43	43	100.0000
hfeng-pmm1	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	het	98.0909	96.7581	99.4609	78.0343	388	13	369	2	2	100.0000
hfeng-pmm1	INDEL	D1_5	map_l125_m2_e1	homalt	99.4609	99.1935	99.7297	84.2620	369	3	369	1	1	100.0000
jlack-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	99.8647	100.0000	99.7297	81.2373	369	0	369	1	0	0.0000
hfeng-pmm3	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	80.2674	369	0	369	0	0
hfeng-pmm2	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	96.0938	96.0938	96.0938	84.8401	369	15	369	15	2	13.3333
hfeng-pmm2	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	80.6806	369	0	369	0	0
cchapple-custom	INDEL	D6_15	map_siren	het	94.8724	94.6429	95.1031	81.6462	265	15	369	19	8	42.1053
ckim-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	82.0525	369	0	369	0	0
ckim-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	hetalt	82.7698	70.8758	99.4609	27.5391	348	143	369	2	2	100.0000

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