PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt

« 1 2 ... 8 9 10 11 12 13 14 15 16 ... 1720 1721 » 551-600 / 86044 show all
anovak-vg	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	0.0000	16.9450	0.0000	0.0000	274	1343	0	0	0
anovak-vg	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	0.0000	20.6568	0.0000	0.0000	195	749	0	0	0
anovak-vg	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	0.0000	16.7981	0.0000	0.0000	277	1372	0	0	0
anovak-vg	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	0.0000	16.4164	0.0000	0.0000	317	1614	0	0	0
anovak-vg	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	hetalt	0.0000	19.7704	0.0000	0.0000	155	629	0	0	0
anovak-vg	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	hetalt	0.0000	9.1116	0.0000	0.0000	40	399	0	0	0
anovak-vg	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	0.0000	8.3333	0.0000	0.0000	1	11	0	0	0
anovak-vg	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt		0.0000	0.0000	0.0000	0	9	0	0	0
anovak-vg	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	0.0000	22.5610	0.0000	0.0000	74	254	0	0	0
anovak-vg	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	0.0000	11.4286	0.0000	0.0000	40	310	0	0	0
anovak-vg	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_gt200	*		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_gt200	het		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	hetalt	0.0000	25.4902	0.0000	0.0000	13	38	0	0	0
anovak-vg	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	hetalt		0.0000	0.0000	0.0000	0	25	0	0	0
anovak-vg	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_gt200	*		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_gt200	het		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	D16_PLUS	map_l100_m0_e0	hetalt		0.0000	0.0000	0.0000	0	4	0	0	0
anovak-vg	INDEL	D16_PLUS	map_l100_m1_e0	hetalt	0.0000	7.6923	0.0000	0.0000	2	24	0	0	0
anovak-vg	INDEL	D16_PLUS	map_l100_m2_e0	hetalt	0.0000	7.6923	0.0000	0.0000	2	24	0	0	0
anovak-vg	INDEL	D16_PLUS	map_l100_m2_e1	hetalt	0.0000	6.6667	0.0000	0.0000	2	28	0	0	0
anovak-vg	INDEL	D16_PLUS	map_l125_m0_e0	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
anovak-vg	INDEL	D16_PLUS	map_l125_m0_e0	homalt		0.0000		100.0000	0	2	0	0	0
anovak-vg	INDEL	D16_PLUS	map_l125_m1_e0	hetalt		0.0000	0.0000	0.0000	0	3	0	0	0
anovak-vg	INDEL	D16_PLUS	map_l125_m2_e0	hetalt		0.0000	0.0000	0.0000	0	3	0	0	0
anovak-vg	INDEL	D16_PLUS	map_l125_m2_e1	hetalt		0.0000	0.0000	0.0000	0	4	0	0	0
anovak-vg	INDEL	D16_PLUS	map_l150_m0_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	D16_PLUS	map_l150_m0_e0	homalt		0.0000		100.0000	0	0	0	0	0
anovak-vg	INDEL	D16_PLUS	map_l150_m1_e0	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
anovak-vg	INDEL	D16_PLUS	map_l150_m1_e0	homalt		0.0000		100.0000	0	0	0	0	0
anovak-vg	INDEL	D16_PLUS	map_l150_m2_e0	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
anovak-vg	INDEL	D16_PLUS	map_l150_m2_e0	homalt		0.0000		100.0000	0	0	0	0	0
anovak-vg	INDEL	D16_PLUS	map_l150_m2_e1	hetalt		0.0000	0.0000	0.0000	0	2	0	0	0
anovak-vg	INDEL	D16_PLUS	map_l150_m2_e1	homalt		0.0000		100.0000	0	0	0	0	0
anovak-vg	INDEL	D16_PLUS	map_l250_m0_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	D16_PLUS	map_l250_m0_e0	homalt		0.0000		100.0000	0	0	0	0	0
anovak-vg	INDEL	D16_PLUS	map_l250_m1_e0	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
anovak-vg	INDEL	D16_PLUS	map_l250_m1_e0	homalt		0.0000		100.0000	0	0	0	0	0
anovak-vg	INDEL	D16_PLUS	map_l250_m2_e0	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
anovak-vg	INDEL	D16_PLUS	map_l250_m2_e1	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
anovak-vg	INDEL	D16_PLUS	map_siren	hetalt	0.0000	6.4516	0.0000	0.0000	2	29	0	0	0
anovak-vg	INDEL	D16_PLUS	segdup	hetalt		0.0000	0.0000	0.0000	0	9	0	0	0
anovak-vg	INDEL	D16_PLUS	segdupwithalt	*		0.0000		100.0000	0	0	0	0	0
anovak-vg	INDEL	D16_PLUS	segdupwithalt	het		0.0000		100.0000	0	0	0	0	0
anovak-vg	INDEL	D16_PLUS	segdupwithalt	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	D16_PLUS	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
anovak-vg	INDEL	D16_PLUS	tech_badpromoters	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge