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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1089 1090 1091 1092 1093 1094 1095 1096 1097 ... 1720 1721 » 54601-54650 / 86044 show all
ckim-dragen	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	98.6425	97.3214	100.0000	74.2389	109	3	110	0	0
ckim-dragen	INDEL	I6_15	map_l100_m1_e0	*	96.9163	96.4912	97.3451	87.7838	110	4	110	3	0	0.0000
ckim-gatk	INDEL	*	map_l100_m1_e0	hetalt	93.5622	87.9032	100.0000	86.7947	109	15	110	0	0
ckim-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	het	72.4655	91.2162	60.1093	74.5125	135	13	110	73	72	98.6301
ckim-gatk	INDEL	I1_5	map_l250_m2_e1	*	94.0171	96.4912	91.6667	97.5093	110	4	110	10	2	20.0000
ckim-isaac	INDEL	*	segdup	hetalt	89.9263	82.3077	99.0991	92.8479	107	23	110	1	1	100.0000
ckim-gatk	INDEL	I6_15	map_l100_m2_e0	*	96.5217	95.6897	97.3684	90.3635	111	5	111	3	1	33.3333
ckim-gatk	INDEL	I6_15	map_l100_m2_e1	*	96.5217	95.6897	97.3684	90.5863	111	5	111	3	1	33.3333
cchapple-custom	INDEL	I1_5	map_l125_m0_e0	homalt	97.7974	97.3684	98.2301	84.0395	111	3	111	2	1	50.0000
cchapple-custom	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	99.0906	99.0741	99.1071	88.6525	107	1	111	1	0	0.0000
ckim-gatk	INDEL	*	map_l100_m2_e0	hetalt	93.1624	87.2000	100.0000	87.7076	109	16	111	0	0
ckim-gatk	INDEL	D1_5	map_l250_m1_e0	het	88.8000	100.0000	79.8561	97.0394	111	0	111	28	1	3.5714
ckim-dragen	INDEL	*	map_l250_m2_e0	homalt	96.5217	96.5217	96.5217	94.9782	111	4	111	4	4	100.0000
ciseli-custom	INDEL	D16_PLUS	HG002compoundhet	het	17.8807	11.8519	36.3934	44.8463	48	357	111	194	186	95.8763
ciseli-custom	INDEL	I1_5	map_l125_m1_e0	homalt	48.9837	34.5566	84.0909	86.4615	113	214	111	21	18	85.7143
jmaeng-gatk	INDEL	*	lowcmp_SimpleRepeat_homopolymer_gt10	*	93.7133	90.3226	97.3684	99.9248	112	12	111	3	0	0.0000
jmaeng-gatk	INDEL	*	map_l250_m2_e0	homalt	97.3684	96.5217	98.2301	95.4673	111	4	111	2	2	100.0000
ltrigg-rtg1	INDEL	I1_5	map_l125_m0_e0	homalt	98.6667	100.0000	97.3684	84.9604	114	0	111	3	1	33.3333
ltrigg-rtg2	INDEL	*	map_l250_m2_e0	homalt	98.2301	96.5217	100.0000	92.6733	111	4	111	0	0
jpowers-varprowl	INDEL	D1_5	map_l250_m2_e0	het	93.2773	91.7355	94.8718	96.5022	111	10	111	6	3	50.0000
gduggal-bwafb	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	68.9441	52.6066	100.0000	53.3613	111	100	111	0	0
gduggal-bwafb	INDEL	I6_15	segdup	het	94.1316	90.3614	98.2301	88.6089	75	8	111	2	2	100.0000
gduggal-bwaplat	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	75.4466	61.5819	97.3684	83.1111	109	68	111	3	1	33.3333
gduggal-bwavard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	52.9207	36.3344	97.3684	65.7658	113	198	111	3	3	100.0000
eyeh-varpipe	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	*	19.5758	15.3515	27.0073	33.7097	107	590	111	300	272	90.6667
eyeh-varpipe	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	18.9437	10.5927	89.5161	64.6724	84	709	111	13	9	69.2308
jli-custom	INDEL	*	map_l100_m1_e0	hetalt	93.6206	88.7097	99.1071	86.4571	110	14	111	1	0	0.0000
hfeng-pmm3	INDEL	I1_5	map_l250_m2_e1	*	96.9432	97.3684	96.5217	95.7407	111	3	111	4	2	50.0000
hfeng-pmm2	INDEL	*	map_l100_m1_e0	hetalt	94.0171	88.7097	100.0000	87.4150	110	14	111	0	0
hfeng-pmm2	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	het	95.7107	95.7317	95.6897	85.9903	157	7	111	5	5	100.0000
hfeng-pmm2	INDEL	D1_5	map_l250_m1_e0	het	95.6897	100.0000	91.7355	95.6159	111	0	111	10	1	10.0000
hfeng-pmm3	INDEL	*	map_l100_m1_e0	hetalt	94.0171	88.7097	100.0000	86.3804	110	14	111	0	0
ckim-vqsr	INDEL	*	map_l100_m2_e0	hetalt	93.1624	87.2000	100.0000	87.7076	109	16	111	0	0
ckim-vqsr	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	het	95.1278	98.7805	91.7355	88.1139	162	2	111	10	8	80.0000
dgrover-gatk	INDEL	*	map_l250_m2_e1	homalt	96.5217	95.6897	97.3684	95.6322	111	5	111	3	2	66.6667
dgrover-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	het	73.0758	91.8919	60.6557	74.5480	136	12	111	72	71	98.6111
eyeh-varpipe	INDEL	*	lowcmp_SimpleRepeat_diTR_51to200	het	34.3653	22.6531	71.1538	64.7856	111	379	111	45	35	77.7778
astatham-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	het	72.3612	91.8919	59.6774	74.1667	136	12	111	75	74	98.6667
bgallagher-sentieon	INDEL	D1_5	map_l250_m1_e0	het	96.5217	100.0000	93.2773	95.6962	111	0	111	8	1	12.5000
bgallagher-sentieon	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	het	71.6605	91.8919	58.7302	73.5664	136	12	111	78	77	98.7179
anovak-vg	INDEL	C1_5	*	het	40.9055	77.7778	27.7500	90.6933	7	2	111	289	20	6.9204
anovak-vg	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	*	26.5368	18.6688	45.8678	43.7209	115	501	111	131	110	83.9695
mlin-fermikit	INDEL	I1_5	map_l150_m2_e1	homalt	65.2941	54.4118	81.6176	84.1676	111	93	111	25	23	92.0000
mlin-fermikit	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	79.1393	65.8683	99.1071	71.1340	110	57	111	1	1	100.0000
mlin-fermikit	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	hetalt	31.5161	18.7373	99.1071	42.5641	92	399	111	1	1	100.0000
ndellapenna-hhga	INDEL	I1_5	map_l250_m2_e1	*	97.3684	97.3684	97.3684	96.2818	111	3	111	3	1	33.3333
gduggal-snapfb	INDEL	D6_15	map_siren	homalt	89.5161	85.3846	94.0678	84.8912	111	19	111	7	6	85.7143
gduggal-snapfb	INDEL	I1_5	map_l125_m0_e0	homalt	96.9508	98.2456	95.6897	91.9107	112	2	111	5	2	40.0000
gduggal-snapvard	INDEL	D6_15	map_l100_m0_e0	*	72.5984	69.9029	75.5102	84.8765	72	31	111	36	22	61.1111
gduggal-snapvard	SNP	*	lowcmp_SimpleRepeat_quadTR_51to200	*	37.3898	74.1259	25.0000	92.7864	106	37	111	333	7	2.1021

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