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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1000 1001 1002 1003 1004 1005 1006 1007 1008 ... 1720 1721 » 50151-50200 / 86044 show all
ckim-dragen	SNP	ti	tech_badpromoters	het	98.8506	97.7273	100.0000	41.8919	43	1	43	0	0
ckim-gatk	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	*	94.5055	93.4783	95.5556	67.1533	43	3	43	2	2	100.0000
ckim-gatk	INDEL	D16_PLUS	map_l100_m1_e0	het	87.7958	95.6522	81.1321	96.3322	44	2	43	10	4	40.0000
ckim-gatk	INDEL	D1_5	map_l100_m2_e1	hetalt	90.3226	82.3529	100.0000	91.7939	42	9	43	0	0
ckim-gatk	INDEL	D6_15	func_cds	*	100.0000	100.0000	100.0000	56.5657	43	0	43	0	0
ckim-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	98.8506	100.0000	97.7273	77.7778	43	0	43	1	1	100.0000
ciseli-custom	INDEL	D1_5	map_l250_m2_e0	homalt	75.4386	71.6667	79.6296	95.8365	43	17	43	11	8	72.7273
ciseli-custom	INDEL	D1_5	map_l250_m2_e1	homalt	75.4386	71.6667	79.6296	95.9276	43	17	43	11	8	72.7273
ciseli-custom	INDEL	D6_15	map_l150_m2_e0	*	54.0881	52.4390	55.8442	94.0769	43	39	43	34	16	47.0588
ciseli-custom	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	*	17.8423	11.0825	45.7447	82.7206	43	345	43	51	42	82.3529
ckim-dragen	INDEL	D16_PLUS	map_l100_m2_e0	het	78.9957	93.7500	68.2540	96.5385	45	3	43	20	2	10.0000
ckim-dragen	INDEL	D1_5	map_l100_m2_e0	hetalt	93.3333	87.5000	100.0000	90.3153	42	6	43	0	0
ckim-dragen	INDEL	I1_5	map_l250_m1_e0	homalt	95.5556	97.7273	93.4783	93.3140	43	1	43	3	3	100.0000
ckim-dragen	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	98.8506	97.7273	100.0000	74.7059	43	1	43	0	0
cchapple-custom	INDEL	I1_5	map_l250_m2_e0	homalt	96.6539	97.7778	95.5556	94.5055	44	1	43	2	1	50.0000
cchapple-custom	INDEL	I6_15	func_cds	*	97.7008	97.6744	97.7273	35.2941	42	1	43	1	1	100.0000
ciseli-custom	INDEL	*	lowcmp_SimpleRepeat_triTR_51to200	het	54.6535	62.0000	48.8636	68.3453	31	19	43	45	30	66.6667
egarrison-hhga	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	homalt	97.7273	95.5556	100.0000	56.5657	43	2	43	0	0
egarrison-hhga	INDEL	D1_5	map_l250_m0_e0	*	93.4783	93.4783	93.4783	97.4011	43	3	43	3	1	33.3333
egarrison-hhga	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_gt10	*	78.1818	75.4386	81.1321	99.3693	43	14	43	10	4	40.0000
egarrison-hhga	INDEL	I16_PLUS	map_siren	het	86.8687	87.7551	86.0000	83.9744	43	6	43	7	4	57.1429
ckim-vqsr	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	*	94.5055	93.4783	95.5556	67.1533	43	3	43	2	2	100.0000
ckim-vqsr	INDEL	D16_PLUS	map_l100_m1_e0	het	88.7014	95.6522	82.6923	96.3989	44	2	43	9	4	44.4444
ckim-vqsr	INDEL	D1_5	map_l100_m2_e1	hetalt	90.3226	82.3529	100.0000	91.7939	42	9	43	0	0
ckim-vqsr	INDEL	D6_15	func_cds	*	100.0000	100.0000	100.0000	56.5657	43	0	43	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	98.8506	100.0000	97.7273	77.7778	43	0	43	1	1	100.0000
ckim-vqsr	INDEL	I6_15	segdup	hetalt	97.7273	95.5556	100.0000	89.5377	43	2	43	0	0
ckim-isaac	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	het	89.9500	88.4615	91.4894	71.1656	46	6	43	4	4	100.0000
ckim-isaac	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	64.1449	48.2759	95.5556	76.5625	42	45	43	2	2	100.0000
dgrover-gatk	INDEL	I1_5	map_l100_m2_e1	hetalt	97.7273	95.5556	100.0000	89.6135	43	2	43	0	0
dgrover-gatk	INDEL	I1_5	map_l250_m1_e0	homalt	96.6292	97.7273	95.5556	94.3396	43	1	43	2	2	100.0000
dgrover-gatk	SNP	ti	tech_badpromoters	het	98.8506	97.7273	100.0000	48.1928	43	1	43	0	0
ckim-vqsr	SNP	ti	tech_badpromoters	het	98.8506	97.7273	100.0000	47.5610	43	1	43	0	0
dgrover-gatk	INDEL	D16_PLUS	map_l100_m2_e0	het	85.2611	93.7500	78.1818	96.1295	45	3	43	12	4	33.3333
dgrover-gatk	INDEL	D1_5	map_l100_m1_e0	hetalt	94.5055	91.4894	97.7273	90.5579	43	4	43	1	0	0.0000
dgrover-gatk	INDEL	D6_15	func_cds	*	100.0000	100.0000	100.0000	55.2083	43	0	43	0	0
dgrover-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	98.8506	100.0000	97.7273	77.8894	43	0	43	1	1	100.0000
egarrison-hhga	INDEL	I1_5	map_l100_m1_e0	hetalt	98.8506	97.7273	100.0000	89.5631	43	1	43	0	0
egarrison-hhga	INDEL	I1_5	map_l100_m2_e0	hetalt	98.8506	97.7273	100.0000	90.5286	43	1	43	0	0
egarrison-hhga	INDEL	I1_5	map_l250_m1_e0	homalt	95.5556	97.7273	93.4783	94.5691	43	1	43	3	1	33.3333
egarrison-hhga	SNP	ti	lowcmp_SimpleRepeat_quadTR_51to200	het	78.1345	68.1818	91.4894	92.2056	45	21	43	4	3	75.0000
hfeng-pmm1	INDEL	I1_5	map_l100_m2_e1	hetalt	97.7273	95.5556	100.0000	89.7375	43	2	43	0	0
hfeng-pmm1	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	98.8506	97.7273	100.0000	75.1445	43	1	43	0	0
hfeng-pmm1	SNP	*	map_l100_m2_e1	hetalt	100.0000	100.0000	100.0000	78.2828	43	0	43	0	0
hfeng-pmm1	SNP	ti	tech_badpromoters	het	98.8506	97.7273	100.0000	44.1558	43	1	43	0	0
hfeng-pmm1	SNP	tv	map_l100_m2_e1	hetalt	100.0000	100.0000	100.0000	78.2828	43	0	43	0	0
jlack-gatk	INDEL	D16_PLUS	map_l100_m2_e0	het	84.3889	91.6667	78.1818	96.3648	44	4	43	12	4	33.3333
jlack-gatk	INDEL	D6_15	func_cds	*	100.0000	100.0000	100.0000	57.8431	43	0	43	0	0
jlack-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	98.8506	100.0000	97.7273	76.7196	43	0	43	1	1	100.0000
hfeng-pmm1	INDEL	D16_PLUS	map_l100_m1_e0	het	90.5697	95.6522	86.0000	93.7578	44	2	43	7	2	28.5714

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