PrecisionFDA
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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
39101-39150 / 86044 show all | |||||||||||||||
| jpowers-varprowl | INDEL | I16_PLUS | func_cds | * | 70.0000 | 58.3333 | 87.5000 | 66.6667 | 7 | 5 | 7 | 1 | 1 | 100.0000 | |
| jpowers-varprowl | INDEL | I16_PLUS | func_cds | het | 75.0000 | 66.6667 | 85.7143 | 58.8235 | 6 | 3 | 6 | 1 | 1 | 100.0000 | |
| jpowers-varprowl | INDEL | I16_PLUS | lowcmp_AllRepeats_51to200bp_gt95identity_merged | homalt | 32.2581 | 20.0000 | 83.3333 | 93.9394 | 5 | 20 | 5 | 1 | 1 | 100.0000 | |
| jpowers-varprowl | INDEL | I16_PLUS | lowcmp_SimpleRepeat_diTR_51to200 | * | 0.0000 | 0.0000 | 90.0000 | 0 | 4 | 0 | 1 | 0 | 0.0000 | ||
| jpowers-varprowl | INDEL | I16_PLUS | lowcmp_SimpleRepeat_diTR_51to200 | het | 0.0000 | 0.0000 | 90.0000 | 0 | 2 | 0 | 1 | 0 | 0.0000 | ||
| jpowers-varprowl | INDEL | I16_PLUS | lowcmp_SimpleRepeat_homopolymer_6to10 | homalt | 57.1429 | 50.0000 | 66.6667 | 86.3636 | 2 | 2 | 2 | 1 | 1 | 100.0000 | |
| jpowers-varprowl | INDEL | I16_PLUS | lowcmp_SimpleRepeat_quadTR_51to200 | homalt | 0.0000 | 0.0000 | 93.7500 | 0 | 0 | 0 | 1 | 1 | 100.0000 | ||
| jpowers-varprowl | INDEL | I16_PLUS | lowcmp_SimpleRepeat_triTR_51to200 | * | 0.0000 | 0.0000 | 66.6667 | 0 | 4 | 0 | 1 | 1 | 100.0000 | ||
| jpowers-varprowl | INDEL | I16_PLUS | lowcmp_SimpleRepeat_triTR_51to200 | het | 0.0000 | 0.0000 | 66.6667 | 0 | 2 | 0 | 1 | 1 | 100.0000 | ||
| jpowers-varprowl | INDEL | I16_PLUS | map_siren | homalt | 37.0370 | 23.8095 | 83.3333 | 89.6552 | 5 | 16 | 5 | 1 | 1 | 100.0000 | |
| jpowers-varprowl | INDEL | I1_5 | func_cds | homalt | 97.4359 | 95.7983 | 99.1304 | 27.2152 | 114 | 5 | 114 | 1 | 1 | 100.0000 | |
| jpowers-varprowl | INDEL | I1_5 | lowcmp_SimpleRepeat_diTR_51to200 | * | 5.5046 | 2.9126 | 50.0000 | 97.1429 | 6 | 200 | 1 | 1 | 1 | 100.0000 | |
| jpowers-varprowl | INDEL | I1_5 | lowcmp_SimpleRepeat_diTR_51to200 | homalt | 0.0000 | 0.0000 | 92.3077 | 0 | 0 | 0 | 1 | 1 | 100.0000 | ||
| jpowers-varprowl | INDEL | I1_5 | map_l125_m0_e0 | homalt | 97.3214 | 95.6140 | 99.0909 | 79.4007 | 109 | 5 | 109 | 1 | 1 | 100.0000 | |
| jpowers-varprowl | INDEL | I1_5 | map_l150_m0_e0 | homalt | 96.9697 | 95.5224 | 98.4615 | 84.3373 | 64 | 3 | 64 | 1 | 1 | 100.0000 | |
| jpowers-varprowl | INDEL | I1_5 | map_l250_m1_e0 | homalt | 94.1176 | 90.9091 | 97.5610 | 91.9450 | 40 | 4 | 40 | 1 | 1 | 100.0000 | |
| jpowers-varprowl | INDEL | I1_5 | map_l250_m2_e0 | homalt | 94.2529 | 91.1111 | 97.6190 | 93.2039 | 41 | 4 | 41 | 1 | 1 | 100.0000 | |
| jpowers-varprowl | INDEL | I1_5 | map_l250_m2_e1 | homalt | 94.3820 | 91.3043 | 97.6744 | 93.2390 | 42 | 4 | 42 | 1 | 1 | 100.0000 | |
| jpowers-varprowl | INDEL | I6_15 | map_l100_m0_e0 | homalt | 81.8182 | 75.0000 | 90.0000 | 80.3922 | 9 | 3 | 9 | 1 | 1 | 100.0000 | |
| jpowers-varprowl | INDEL | I6_15 | map_l100_m1_e0 | homalt | 82.7586 | 72.7273 | 96.0000 | 78.0702 | 24 | 9 | 24 | 1 | 1 | 100.0000 | |
| jpowers-varprowl | INDEL | I6_15 | map_l100_m2_e0 | homalt | 82.7586 | 72.7273 | 96.0000 | 80.4688 | 24 | 9 | 24 | 1 | 1 | 100.0000 | |
| jpowers-varprowl | INDEL | I6_15 | map_l100_m2_e1 | homalt | 82.7586 | 72.7273 | 96.0000 | 80.6202 | 24 | 9 | 24 | 1 | 1 | 100.0000 | |
| jpowers-varprowl | INDEL | I6_15 | map_l125_m0_e0 | homalt | 72.7273 | 66.6667 | 80.0000 | 85.7143 | 4 | 2 | 4 | 1 | 1 | 100.0000 | |
| jpowers-varprowl | INDEL | I6_15 | map_l125_m1_e0 | homalt | 81.4815 | 73.3333 | 91.6667 | 82.0896 | 11 | 4 | 11 | 1 | 1 | 100.0000 | |
| jpowers-varprowl | INDEL | I6_15 | map_l125_m2_e0 | homalt | 81.4815 | 73.3333 | 91.6667 | 84.8101 | 11 | 4 | 11 | 1 | 1 | 100.0000 | |
| jpowers-varprowl | INDEL | I6_15 | map_l125_m2_e1 | homalt | 81.4815 | 73.3333 | 91.6667 | 85.1852 | 11 | 4 | 11 | 1 | 1 | 100.0000 | |
| jpowers-varprowl | INDEL | I6_15 | map_l150_m2_e1 | homalt | 61.5385 | 50.0000 | 80.0000 | 91.8033 | 4 | 4 | 4 | 1 | 1 | 100.0000 | |
| jpowers-varprowl | INDEL | I6_15 | segdup | homalt | 84.2758 | 74.4681 | 97.0588 | 89.7281 | 35 | 12 | 33 | 1 | 1 | 100.0000 | |
| jpowers-varprowl | SNP | * | lowcmp_SimpleRepeat_triTR_51to200 | het | 93.3333 | 100.0000 | 87.5000 | 97.4359 | 7 | 0 | 7 | 1 | 0 | 0.0000 | |
| jpowers-varprowl | SNP | * | lowcmp_SimpleRepeat_triTR_51to200 | homalt | 80.0000 | 100.0000 | 66.6667 | 96.6667 | 2 | 0 | 2 | 1 | 0 | 0.0000 | |
| jpowers-varprowl | SNP | * | tech_badpromoters | homalt | 98.7500 | 98.7500 | 98.7500 | 50.6173 | 79 | 1 | 79 | 1 | 1 | 100.0000 | |
| jpowers-varprowl | SNP | ti | lowcmp_SimpleRepeat_triTR_51to200 | * | 94.1176 | 100.0000 | 88.8889 | 97.0492 | 8 | 0 | 8 | 1 | 0 | 0.0000 | |
| jpowers-varprowl | SNP | ti | lowcmp_SimpleRepeat_triTR_51to200 | homalt | 80.0000 | 100.0000 | 66.6667 | 95.6522 | 2 | 0 | 2 | 1 | 0 | 0.0000 | |
| jpowers-varprowl | SNP | ti | tech_badpromoters | homalt | 98.7952 | 100.0000 | 97.6190 | 43.2432 | 41 | 0 | 41 | 1 | 1 | 100.0000 | |
| jpowers-varprowl | SNP | tv | lowcmp_SimpleRepeat_triTR_51to200 | * | 66.6667 | 100.0000 | 50.0000 | 97.9381 | 1 | 0 | 1 | 1 | 0 | 0.0000 | |
| jpowers-varprowl | SNP | tv | lowcmp_SimpleRepeat_triTR_51to200 | het | 66.6667 | 100.0000 | 50.0000 | 97.3684 | 1 | 0 | 1 | 1 | 0 | 0.0000 | |
| ltrigg-rtg1 | INDEL | * | func_cds | * | 99.3231 | 98.8764 | 99.7738 | 35.4745 | 440 | 5 | 441 | 1 | 0 | 0.0000 | |
| ltrigg-rtg1 | INDEL | * | func_cds | het | 99.0610 | 98.5981 | 99.5283 | 36.1446 | 211 | 3 | 211 | 1 | 0 | 0.0000 | |
| ltrigg-rtg1 | INDEL | * | lowcmp_AllRepeats_gt200bp_gt95identity_merged | * | 92.4324 | 90.0000 | 95.0000 | 99.2404 | 18 | 2 | 19 | 1 | 0 | 0.0000 | |
| ltrigg-rtg1 | INDEL | * | lowcmp_AllRepeats_gt200bp_gt95identity_merged | het | 96.2963 | 100.0000 | 92.8571 | 99.0759 | 12 | 0 | 13 | 1 | 0 | 0.0000 | |
| ltrigg-rtg1 | INDEL | * | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged | hetalt | 93.0144 | 87.4251 | 99.3671 | 72.7116 | 146 | 21 | 157 | 1 | 1 | 100.0000 | |
| ltrigg-rtg1 | INDEL | * | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged | * | 91.0816 | 88.2353 | 94.1176 | 99.3388 | 15 | 2 | 16 | 1 | 0 | 0.0000 | |
| ltrigg-rtg1 | INDEL | * | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged | het | 95.6522 | 100.0000 | 91.6667 | 99.1831 | 10 | 0 | 11 | 1 | 0 | 0.0000 | |
| ltrigg-rtg1 | INDEL | * | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged | hetalt | 96.5568 | 93.9394 | 99.3243 | 87.0289 | 124 | 8 | 147 | 1 | 1 | 100.0000 | |
| ltrigg-rtg1 | INDEL | * | lowcmp_SimpleRepeat_homopolymer_gt10 | * | 88.4082 | 79.8387 | 99.0385 | 99.9179 | 99 | 25 | 103 | 1 | 1 | 100.0000 | |
| ltrigg-rtg1 | INDEL | * | lowcmp_SimpleRepeat_homopolymer_gt10 | hetalt | 83.3333 | 75.0000 | 93.7500 | 99.9211 | 12 | 4 | 15 | 1 | 1 | 100.0000 | |
| ltrigg-rtg1 | INDEL | * | map_l100_m0_e0 | hetalt | 90.4198 | 84.8485 | 96.7742 | 93.9216 | 28 | 5 | 30 | 1 | 1 | 100.0000 | |
| ltrigg-rtg1 | INDEL | * | map_l100_m1_e0 | hetalt | 91.3043 | 84.6774 | 99.0566 | 91.1148 | 105 | 19 | 105 | 1 | 1 | 100.0000 | |
| ltrigg-rtg1 | INDEL | I1_5 | lowcmp_SimpleRepeat_triTR_11to50 | homalt | 99.4350 | 99.2509 | 99.6198 | 58.8419 | 265 | 2 | 262 | 1 | 0 | 0.0000 | |
| ltrigg-rtg1 | INDEL | I1_5 | lowcmp_SimpleRepeat_triTR_51to200 | * | 91.7498 | 88.0000 | 95.8333 | 64.1791 | 22 | 3 | 23 | 1 | 0 | 0.0000 | |