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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 327 328 329 330 331 332 333 334 335 ... 1720 1721 » 16501-16550 / 86044 show all
jmaeng-gatk	INDEL	D6_15	HG002complexvar	hetalt	93.2190	90.3258	96.3037	47.2880	915	98	964	37	37	100.0000
jpowers-varprowl	INDEL	*	map_siren	homalt	94.9463	91.6384	98.5020	74.3563	2433	222	2433	37	25	67.5676
jpowers-varprowl	INDEL	D1_5	map_l150_m1_e0	het	93.7564	95.0207	92.5253	90.0901	458	24	458	37	19	51.3514
ltrigg-rtg1	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_11to50	*	99.1571	98.6358	99.6839	46.3252	11713	162	11670	37	13	35.1351
gduggal-snapplat	INDEL	D1_5	map_l150_m0_e0	*	82.2615	77.8547	87.1972	95.7884	225	64	252	37	10	27.0270
gduggal-snapplat	SNP	*	lowcmp_SimpleRepeat_diTR_51to200	*	40.4040	47.6190	35.0877	98.8711	20	22	20	37	0	0.0000
gduggal-snapvard	INDEL	D1_5	func_cds	*	87.5742	91.8239	83.7004	42.8212	146	13	190	37	33	89.1892
gduggal-snapvard	INDEL	D1_5	func_cds	het	87.2852	100.0000	77.4390	47.4359	85	0	127	37	33	89.1892
gduggal-snapfb	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_11to50	het	65.4311	59.8361	72.1805	46.5863	73	49	96	37	37	100.0000
gduggal-snapfb	SNP	*	HG002compoundhet	hetalt	97.7828	99.7680	95.8751	27.4859	860	2	860	37	8	21.6216
gduggal-snapfb	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	75.0000	0	0	0	37	0	0.0000
gduggal-snapfb	SNP	*	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.4911	99.5894	99.3930	57.8569	6063	25	6059	37	15	40.5405
gduggal-snapfb	SNP	ti	map_l100_m2_e0	homalt	98.4558	97.1544	99.7924	69.0150	17788	521	17789	37	21	56.7568
gduggal-snapfb	SNP	ti	map_l100_m2_e1	homalt	98.4714	97.1829	99.7946	68.9893	17973	521	17974	37	21	56.7568
gduggal-snapfb	SNP	tv	HG002compoundhet	hetalt	97.7828	99.7680	95.8751	27.4859	860	2	860	37	8	21.6216
gduggal-snapfb	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	75.0000	0	0	0	37	0	0.0000
gduggal-snapplat	INDEL	*	lowcmp_SimpleRepeat_triTR_51to200	homalt	49.8073	51.0638	48.6111	53.5484	24	23	35	37	30	81.0811
ghariani-varprowl	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	*	67.2129	61.2360	74.4828	76.8000	109	69	108	37	37	100.0000
ghariani-varprowl	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_11to50	homalt	68.6210	61.1111	78.2353	64.0592	132	84	133	37	35	94.5946
gduggal-snapvard	INDEL	I16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	*	0.0000	0.0000	38.3333	68.9119	0	47	23	37	20	54.0541
gduggal-snapvard	INDEL	I16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	het	0.0000	0.0000	38.3333	68.7500	0	15	23	37	20	54.0541
gduggal-snapvard	INDEL	I6_15	map_l150_m2_e0	*	61.1650	72.0000	53.1646	88.2789	18	7	42	37	29	78.3784
gduggal-snapvard	INDEL	I6_15	map_l150_m2_e0	het	64.5327	93.3333	49.3151	88.3013	14	1	36	37	29	78.3784
gduggal-snapvard	INDEL	I6_15	map_l150_m2_e1	*	62.2963	74.0741	53.7500	88.5057	20	7	43	37	29	78.3784
gduggal-snapvard	INDEL	I6_15	map_l150_m2_e1	het	65.2174	93.7500	50.0000	88.5093	15	1	37	37	29	78.3784
gduggal-snapvard	SNP	*	map_l100_m0_e0	homalt	97.5410	95.5077	99.6627	63.7532	11098	522	10932	37	28	75.6757
gduggal-snapfb	INDEL	D1_5	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.3852	99.0251	99.7479	54.5094	14626	144	14641	37	15	40.5405
gduggal-snapfb	INDEL	D1_5	map_l150_m2_e1	het	94.6145	96.1686	93.1099	86.6848	502	20	500	37	5	13.5135
ghariani-varprowl	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	87.0329	79.1574	96.6486	67.1233	1071	282	1067	37	32	86.4865
ghariani-varprowl	INDEL	D1_5	map_l250_m1_e0	het	83.9216	96.3964	74.3056	96.7814	107	4	107	37	3	8.1081
raldana-dualsentieon	SNP	ti	map_l250_m0_e0	het	96.7570	97.4304	96.0929	92.6538	910	24	910	37	0	0.0000
raldana-dualsentieon	SNP	tv	map_l250_m2_e0	het	97.4585	96.8557	98.0689	89.2184	1879	61	1879	37	1	2.7027
rpoplin-dv42	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	89.3483	83.7325	95.7714	64.0509	839	163	838	37	35	94.5946
raldana-dualsentieon	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	94.8453	92.6241	97.1756	71.4036	1306	104	1273	37	32	86.4865
raldana-dualsentieon	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.3948	99.8304	98.9630	72.1359	3531	6	3531	37	37	100.0000
cchapple-custom	SNP	*	HG002complexvar	homalt	99.8273	99.6680	99.9871	18.5601	287616	958	286343	37	32	86.4865
cchapple-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	99.2560	99.0686	99.4441	78.7870	6595	62	6619	37	15	40.5405
cchapple-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	99.0491	98.9618	99.1365	81.8417	4194	44	4248	37	15	40.5405
ckim-dragen	INDEL	D1_5	map_l125_m2_e0	het	96.3746	97.5131	95.2625	88.9141	745	19	744	37	3	8.1081
ckim-dragen	INDEL	D1_5	map_l125_m2_e1	het	96.4026	97.5325	95.2986	89.0022	751	19	750	37	3	8.1081
ckim-dragen	INDEL	D6_15	*	hetalt	96.4645	93.5894	99.5217	32.8589	7650	524	7699	37	37	100.0000
ckim-dragen	SNP	*	map_l100_m2_e0	homalt	99.6377	99.4114	99.8650	58.3933	27361	162	27366	37	33	89.1892
ckim-dragen	SNP	*	map_l100_m2_e1	homalt	99.6376	99.4100	99.8663	58.3837	27632	164	27637	37	33	89.1892
ckim-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	96.6722	93.9296	99.5798	30.8791	8727	564	8769	37	37	100.0000
ckim-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	96.6722	93.9296	99.5798	30.8791	8727	564	8769	37	37	100.0000
ckim-gatk	INDEL	D1_5	segdup	*	98.1263	99.5467	96.7458	96.0214	1098	5	1100	37	2	5.4054
ckim-gatk	INDEL	D6_15	HG002complexvar	hetalt	93.7593	91.3129	96.3403	47.3985	925	88	974	37	37	100.0000
cchapple-custom	INDEL	*	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.6346	99.4826	99.7870	59.5165	16344	85	17330	37	22	59.4595
cchapple-custom	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	het	96.3322	95.2381	97.4518	62.1184	580	29	1415	37	32	86.4865
cchapple-custom	INDEL	D1_5	map_l100_m0_e0	*	96.2312	96.7555	95.7126	83.6954	835	28	826	37	5	13.5135

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