PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
85951-86000 / 86044 show all
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
100.0000
0.0000
0.0000
10000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
100.0000
0.0000
0.0000
10000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
50.0000
0.0000
0.0000
11000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
8.3333
0.0000
0.0000
111000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
100.0000
0.0000
0.0000
10000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_diTR_gt200*
0.0000
100.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_diTR_gt200het
0.0000
100.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
100.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.0000
0.0000
02000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
0.0000
01000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
0.0000
01000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_triTR_11to50homalt
99.0806
98.1780
100.0000
28.9811
140126138700
gduggal-snapvardSNPtilowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
98.7500
20100
gduggal-snapvardSNPtilowcmp_SimpleRepeat_triTR_gt200*
0.0000
100.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_triTR_gt200het
0.0000
100.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtimap_l100_m0_e0hetalt
0.0000
0.0000
0.0000
014000
gduggal-snapvardSNPtimap_l100_m1_e0hetalt
0.0000
0.0000
0.0000
029000
gduggal-snapvardSNPtimap_l100_m2_e0hetalt
0.0000
0.0000
0.0000
030000
gduggal-snapvardSNPtimap_l100_m2_e1hetalt
0.0000
0.0000
0.0000
031000
gduggal-snapvardSNPtimap_l125_m0_e0hetalt
0.0000
0.0000
0.0000
08000
gduggal-snapvardSNPtimap_l125_m1_e0hetalt
0.0000
0.0000
0.0000
024000
gduggal-snapvardSNPtimap_l125_m2_e0hetalt
0.0000
0.0000
0.0000
024000
gduggal-snapvardSNPtimap_l125_m2_e1hetalt
0.0000
0.0000
0.0000
024000
gduggal-snapvardSNPtimap_l150_m0_e0hetalt
0.0000
0.0000
0.0000
03000
gduggal-snapvardSNPtimap_l150_m1_e0hetalt
0.0000
0.0000
0.0000
015000
gduggal-snapvardSNPtimap_l150_m2_e0hetalt
0.0000
0.0000
0.0000
015000