PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
83201-83250 / 86044 show all
ghariani-varprowlSNPtvlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ghariani-varprowlSNPtvlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ghariani-varprowlSNPtvlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNPtvlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ghariani-varprowlSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
013000
ghariani-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.0000
0.0000
015000
ghariani-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ghariani-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ghariani-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ghariani-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
ghariani-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
ghariani-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ghariani-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ghariani-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ghariani-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
02000
ghariani-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
02000
ghariani-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
03000
ghariani-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.0000
0.0000
015000
ghariani-varprowlSNPtvlowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.0000
0.0000
01000
ghariani-varprowlSNPtvlowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNPtvlowcmp_SimpleRepeat_diTR_51to200homalt
94.1176
88.8889
100.0000
96.0396
81800
ghariani-varprowlSNPtvlowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.0000
0.0000
05000
ghariani-varprowlSNPtvlowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
ghariani-varprowlSNPtvlowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
ghariani-varprowlSNPtvlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNPtvlowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
ghariani-varprowlSNPtvlowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
0.0000
05000
ghariani-varprowlSNPtvlowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNPtvlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
ghariani-varprowlSNPtvlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
ghariani-varprowlSNPtvlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNPtvlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNPtvlowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
0.0000
01000
ghariani-varprowlSNPtvlowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNPtvlowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNPtvlowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNPtvlowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNPtvlowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNPtvmap_l100_m0_e0hetalt
0.0000
0.0000
0.0000
016000
ghariani-varprowlSNPtvmap_l100_m1_e0hetalt
0.0000
0.0000
0.0000
041000
ghariani-varprowlSNPtvmap_l100_m2_e0hetalt
0.0000
0.0000
0.0000
042000
ghariani-varprowlSNPtvmap_l100_m2_e1hetalt
0.0000
0.0000
0.0000
043000
ghariani-varprowlSNPtvmap_l125_m0_e0hetalt
0.0000
0.0000
0.0000
09000
ghariani-varprowlSNPtvmap_l125_m1_e0hetalt
0.0000
0.0000
0.0000
030000
ghariani-varprowlSNPtvmap_l125_m2_e0hetalt
0.0000
0.0000
0.0000
030000
ghariani-varprowlSNPtvmap_l125_m2_e1hetalt
0.0000
0.0000
0.0000
030000