PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
82901-82950 / 86044 show all
ghariani-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
0.4191
0.0000
0.0000
204752000
ghariani-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.6615
0.0000
0.0000
395857000
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.7096
0.0000
0.0000
273778000
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
0179000
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
1.2658
0.0000
0.0000
4312000
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
01000
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
01000
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
1.5915
0.0000
0.0000
181113000
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.4608
0.0000
0.0000
1216000
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
1.2780
0.0000
0.0000
4309000
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
023000
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELI1_5map_l100_m0_e0hetalt
0.0000
0.0000
0.0000
09000
ghariani-varprowlINDELI1_5map_l100_m1_e0hetalt
0.0000
0.0000
0.0000
044000
ghariani-varprowlINDELI1_5map_l100_m2_e0hetalt
0.0000
0.0000
0.0000
044000
ghariani-varprowlINDELI1_5map_l100_m2_e1hetalt
0.0000
0.0000
0.0000
045000
ghariani-varprowlINDELI1_5map_l125_m0_e0hetalt
0.0000
0.0000
0.0000
04000
ghariani-varprowlINDELI1_5map_l125_m1_e0hetalt
0.0000
0.0000
0.0000
017000
ghariani-varprowlINDELI1_5map_l125_m2_e0hetalt
0.0000
0.0000
0.0000
019000
ghariani-varprowlINDELI1_5map_l125_m2_e1hetalt
0.0000
0.0000
0.0000
019000
ghariani-varprowlINDELI1_5map_l150_m0_e0hetalt
0.0000
0.0000
0.0000
03000
ghariani-varprowlINDELI1_5map_l150_m1_e0hetalt
0.0000
0.0000
0.0000
09000
ghariani-varprowlINDELI1_5map_l150_m2_e0hetalt
0.0000
0.0000
0.0000
09000
ghariani-varprowlINDELI1_5map_l150_m2_e1hetalt
0.0000
0.0000
0.0000
010000
ghariani-varprowlINDELI1_5map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELI1_5map_l250_m0_e0homalt
94.1176
88.8889
100.0000
96.8127
81800
ghariani-varprowlINDELI1_5map_l250_m1_e0hetalt
0.0000
0.0000
0.0000
02000
ghariani-varprowlINDELI1_5map_l250_m2_e0hetalt
0.0000
0.0000
0.0000
02000
ghariani-varprowlINDELI1_5map_l250_m2_e1hetalt
0.0000
0.0000
0.0000
02000
ghariani-varprowlINDELI1_5map_sirenhetalt
0.0000
0.0000
0.0000
0112000
ghariani-varprowlINDELI1_5segduphetalt
0.0000
0.0000
0.0000
048000
ghariani-varprowlINDELI1_5segdupwithalt*
0.0000
100.0000
00000
ghariani-varprowlINDELI1_5segdupwithalthet
0.0000
100.0000
00000
ghariani-varprowlINDELI1_5segdupwithalthetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELI1_5segdupwithalthomalt
0.0000
100.0000
00000
ghariani-varprowlINDELI1_5tech_badpromotershetalt
0.0000
0.0000
0.0000
01000
ghariani-varprowlINDELI1_5tech_badpromotershomalt
86.9565
76.9231
100.0000
62.9630
1031000