PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
82701-82750 / 86044 show all
gduggal-snapfbINDELI1_5lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
100.0000
00000
gduggal-snapfbINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.9930
10100
gduggal-snapfbINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
gduggal-snapfbINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.9828
10100
gduggal-snapfbINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
gduggal-snapfbINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
gduggal-snapfbINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
gduggal-snapfbINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
gduggal-snapfbINDELI1_5map_l250_m0_e0hetalt
0.0000
100.0000
00000
gduggal-snapfbINDELI1_5map_l250_m0_e0homalt
94.1176
88.8889
100.0000
98.8473
81800
gduggal-snapfbINDELI1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
98.1132
20200
gduggal-snapfbINDELI1_5segdupwithalt*
0.0000
100.0000
00000
gduggal-snapfbINDELI1_5segdupwithalthet
0.0000
100.0000
00000
gduggal-snapfbINDELI1_5segdupwithalthetalt
0.0000
100.0000
00000
gduggal-snapfbINDELI1_5segdupwithalthomalt
0.0000
100.0000
00000
gduggal-snapfbINDELI1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
80.0000
10100
gduggal-snapfbINDELI1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
60.6061
1301300
gduggal-snapfbINDELI6_15decoy*
0.0000
100.0000
00000
gduggal-snapfbINDELI6_15decoyhet
0.0000
100.0000
00000
gduggal-snapfbINDELI6_15decoyhetalt
0.0000
100.0000
00000
gduggal-snapfbINDELI6_15decoyhomalt
0.0000
100.0000
00000
gduggal-snapfbINDELI6_15func_cdshomalt
75.0000
60.0000
100.0000
30.7692
96900
gduggal-snapfbINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
gduggal-snapfbINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-snapfbINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
gduggal-snapfbINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapfbINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
gduggal-snapfbINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-snapfbINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
gduggal-snapfbINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapfbINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELD6_15map_l100_m2_e1hetalt
0.0000
1.3699
0.0000
0.0000
172000
ghariani-varprowlINDELD6_15map_l100_m2_e1homalt
82.4561
70.1493
100.0000
82.6568
47204700
ghariani-varprowlINDELD6_15map_l125_m0_e0hetalt
0.0000
0.0000
0.0000
06000
ghariani-varprowlINDELD6_15map_l125_m0_e0homalt
85.7143
75.0000
100.0000
90.3226
93900
ghariani-varprowlINDELD6_15map_l125_m1_e0hetalt
0.0000
0.0000
0.0000
019000
ghariani-varprowlINDELD6_15map_l125_m1_e0homalt
88.5246
79.4118
100.0000
84.2105
2772700
ghariani-varprowlINDELD6_15map_l125_m2_e0hetalt
0.0000
0.0000
0.0000
019000
ghariani-varprowlINDELD6_15map_l125_m2_e0homalt
89.2308
80.5556
100.0000
84.8168
2972900
ghariani-varprowlINDELD6_15map_l125_m2_e1hetalt
0.0000
0.0000
0.0000
020000
ghariani-varprowlINDELD6_15map_l125_m2_e1homalt
87.8788
78.3784
100.0000
84.9741
2982900
ghariani-varprowlINDELD6_15map_l150_m0_e0hetalt
0.0000
0.0000
0.0000
05000
ghariani-varprowlINDELD6_15map_l150_m0_e0homalt
92.3077
85.7143
100.0000
92.2078
61600
ghariani-varprowlINDELD6_15map_l150_m1_e0hetalt
0.0000
0.0000
0.0000
08000
ghariani-varprowlINDELD6_15map_l150_m1_e0homalt
86.9565
76.9231
100.0000
85.2941
2062000
ghariani-varprowlINDELD6_15map_l150_m2_e0hetalt
0.0000
0.0000
0.0000
08000