PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
82401-82450 / 86044 show all
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
01000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
01000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
97.0588
30300
gduggal-snapfbINDELD1_5map_l125_m1_e0hetalt
81.8182
69.2308
100.0000
96.7136
94700
gduggal-snapfbINDELD1_5map_l125_m2_e0hetalt
80.0000
66.6667
100.0000
96.6102
105800
gduggal-snapfbINDELD1_5map_l125_m2_e1hetalt
80.0000
66.6667
100.0000
96.6667
105800
gduggal-snapfbINDELD1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
97.3333
20200
gduggal-snapfbINDELD1_5map_l150_m1_e0hetalt
72.7273
57.1429
100.0000
97.6879
43400
gduggal-snapfbINDELD1_5map_l150_m2_e0hetalt
72.7273
57.1429
100.0000
97.8947
43400
gduggal-snapfbINDELD1_5map_l150_m2_e1hetalt
76.9231
62.5000
100.0000
97.4093
53500
gduggal-snapfbINDELD1_5map_l250_m0_e0hetalt
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5map_l250_m0_e0homalt
100.0000
100.0000
100.0000
98.5635
1301300
gduggal-snapfbINDELD1_5map_l250_m1_e0hetalt
80.0000
66.6667
100.0000
97.5000
21200
gduggal-snapfbINDELD1_5map_l250_m1_e0homalt
99.1150
98.2456
100.0000
96.5261
5615600
gduggal-snapfbINDELD1_5map_l250_m2_e0hetalt
80.0000
66.6667
100.0000
97.8261
21200
gduggal-snapfbINDELD1_5map_l250_m2_e0homalt
99.1597
98.3333
100.0000
96.7367
5915900
gduggal-snapfbINDELD1_5map_l250_m2_e1hetalt
80.0000
66.6667
100.0000
97.8947
21200
gduggal-snapfbINDELD1_5map_l250_m2_e1homalt
99.1597
98.3333
100.0000
96.8074
5915900
gduggal-snapfbINDELD1_5segduphetalt
90.5263
82.6923
100.0000
98.1308
4391400
gduggal-snapfbINDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9941
10100
gduggal-snapfbINDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9904
10100
gduggal-snapfbINDELD1_5segdupwithalthetalt
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5segdupwithalthomalt
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5tech_badpromotershet
93.3333
87.5000
100.0000
65.2174
71800
gduggal-snapfbINDELD1_5tech_badpromotershetalt
0.0000
50.0000
0.0000
0.0000
11000
gduggal-snapfbINDELD6_15decoy*
100.0000
100.0000
100.0000
99.7685
10100
gduggal-snapfbINDELD6_15decoyhet
0.0000
0.0000
100.0000
99.6656
00100
gduggal-snapfbINDELD6_15decoyhetalt
100.0000
100.0000
10000
gduggal-snapfbINDELD6_15decoyhomalt
0.0000
100.0000
00000
gduggal-snapfbINDELD6_15func_cdshetalt
0.0000
50.0000
0.0000
0.0000
11000
gduggal-snapfbINDELD6_15func_cdshomalt
80.0000
66.6667
100.0000
52.9412
84800
gduggal-snapfbINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
50.0000
33.3333
100.0000
97.4684
24200
gduggal-snapfbINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
80.0000
66.6667
100.0000
95.5556
21200
gduggal-snapfbINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
02000
gduggal-snapfbINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
01000
gduggal-snapfbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
66.6667
50.0000
100.0000
97.4684
22200
gduggal-snapfbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
95.5556
20200
gduggal-snapfbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
02000
gduggal-snapfbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapfbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
02000
gduggal-snapfbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
01000
gduggal-snapfbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000