PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
81751-81800 / 86044 show all
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.6680
0.0000
0.0000
466840000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
0491000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.9732
0.0000
0.0000
4407000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
01000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
01000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.5358
0.0000
0.0000
81485000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.1538
0.0000
0.0000
1649000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.4329
0.0000
0.0000
2460000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
049000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
013000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_triTR_gt200*
0.0000
100.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_triTR_gt200het
0.0000
100.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELD1_5map_l100_m0_e0hetalt
0.0000
0.0000
0.0000
014000
ghariani-varprowlINDELD1_5map_l100_m1_e0hetalt
0.0000
0.0000
0.0000
047000
ghariani-varprowlINDELD1_5map_l100_m2_e0hetalt
0.0000
0.0000
0.0000
048000
ghariani-varprowlINDELD1_5map_l100_m2_e1hetalt
0.0000
1.9608
0.0000
0.0000
150000
ghariani-varprowlINDELD1_5map_l125_m0_e0hetalt
0.0000
0.0000
0.0000
03000
ghariani-varprowlINDELD1_5map_l125_m1_e0hetalt
0.0000
0.0000
0.0000
013000
ghariani-varprowlINDELD1_5map_l125_m2_e0hetalt
0.0000
0.0000
0.0000
015000
ghariani-varprowlINDELD1_5map_l125_m2_e1hetalt
0.0000
0.0000
0.0000
015000
ghariani-varprowlINDELD1_5map_l150_m0_e0hetalt
0.0000
0.0000
0.0000
02000
ghariani-varprowlINDELD1_5map_l150_m1_e0hetalt
0.0000
0.0000
0.0000
07000
ghariani-varprowlINDELD1_5map_l150_m2_e0hetalt
0.0000
0.0000
0.0000
07000
ghariani-varprowlINDELD1_5map_l150_m2_e1hetalt
0.0000
0.0000
0.0000
08000
ghariani-varprowlINDELD1_5map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELD1_5map_l250_m0_e0homalt
91.6667
84.6154
100.0000
97.3301
1121100
ghariani-varprowlINDELD1_5map_l250_m1_e0hetalt
0.0000
0.0000
0.0000
03000
ghariani-varprowlINDELD1_5map_l250_m2_e0hetalt
0.0000
0.0000
0.0000
03000
ghariani-varprowlINDELD1_5map_l250_m2_e1hetalt
0.0000
0.0000
0.0000
03000
ghariani-varprowlINDELD1_5map_sirenhetalt
0.0000
0.0000
0.0000
084000
ghariani-varprowlINDELD1_5segduphetalt
0.0000
1.9231
0.0000
0.0000
151000
ghariani-varprowlINDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9952
10100
ghariani-varprowlINDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9942
10100
ghariani-varprowlINDELD1_5segdupwithalthetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELD1_5segdupwithalthomalt
0.0000
100.0000
00000
ghariani-varprowlINDELD1_5tech_badpromotershetalt
0.0000
0.0000
0.0000
02000
ghariani-varprowlINDELD1_5tech_badpromotershomalt
80.0000
66.6667
100.0000
40.0000
63600
ghariani-varprowlINDELD6_15*hetalt
0.0000
0.3915
0.0000
0.0000
328142000