PrecisionFDA
Truth Challenge
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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
79951-80000 / 86044 show all | |||||||||||||||
| ckim-isaac | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged | * | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ckim-isaac | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ckim-isaac | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ckim-isaac | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ckim-isaac | INDEL | I6_15 | lowcmp_SimpleRepeat_diTR_51to200 | * | 52.8000 | 35.8696 | 100.0000 | 62.5000 | 33 | 59 | 33 | 0 | 0 | ||
| ckim-isaac | INDEL | I6_15 | lowcmp_SimpleRepeat_diTR_51to200 | het | 55.5556 | 100.0000 | 5 | 4 | 0 | 0 | 0 | ||||
| ckim-isaac | INDEL | I6_15 | lowcmp_SimpleRepeat_diTR_51to200 | hetalt | 50.4505 | 33.7349 | 100.0000 | 36.5385 | 28 | 55 | 33 | 0 | 0 | ||
| ckim-isaac | INDEL | I6_15 | lowcmp_SimpleRepeat_diTR_51to200 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ckim-isaac | INDEL | I6_15 | lowcmp_SimpleRepeat_homopolymer_gt10 | * | 0.0000 | 100.0000 | 0 | 2 | 0 | 0 | 0 | ||||
| ckim-isaac | INDEL | I6_15 | lowcmp_SimpleRepeat_homopolymer_gt10 | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ckim-isaac | INDEL | I6_15 | lowcmp_SimpleRepeat_homopolymer_gt10 | hetalt | 0.0000 | 100.0000 | 0 | 2 | 0 | 0 | 0 | ||||
| ckim-isaac | INDEL | I6_15 | lowcmp_SimpleRepeat_homopolymer_gt10 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ckim-isaac | INDEL | I6_15 | lowcmp_SimpleRepeat_quadTR_51to200 | hetalt | 60.8295 | 43.7086 | 100.0000 | 34.7826 | 66 | 85 | 75 | 0 | 0 | ||
| ckim-isaac | INDEL | I6_15 | lowcmp_SimpleRepeat_quadTR_51to200 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ckim-isaac | INDEL | I6_15 | lowcmp_SimpleRepeat_quadTR_gt200 | * | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ckim-isaac | INDEL | I6_15 | lowcmp_SimpleRepeat_quadTR_gt200 | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ckim-isaac | INDEL | I6_15 | lowcmp_SimpleRepeat_quadTR_gt200 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ckim-isaac | INDEL | I6_15 | lowcmp_SimpleRepeat_quadTR_gt200 | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ckim-isaac | INDEL | I6_15 | lowcmp_SimpleRepeat_triTR_51to200 | * | 70.0000 | 53.8462 | 100.0000 | 53.3333 | 7 | 6 | 7 | 0 | 0 | ||
| ckim-isaac | INDEL | I6_15 | lowcmp_SimpleRepeat_triTR_51to200 | het | 100.0000 | 100.0000 | 1 | 0 | 0 | 0 | 0 | ||||
| ckim-isaac | INDEL | I6_15 | lowcmp_SimpleRepeat_triTR_51to200 | hetalt | 66.6667 | 50.0000 | 100.0000 | 12.5000 | 6 | 6 | 7 | 0 | 0 | ||
| ckim-isaac | INDEL | I6_15 | lowcmp_SimpleRepeat_triTR_51to200 | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ckim-isaac | INDEL | I6_15 | map_l100_m0_e0 | * | 53.3333 | 36.3636 | 100.0000 | 94.2857 | 12 | 21 | 12 | 0 | 0 | ||
| ckim-isaac | INDEL | I6_15 | map_l100_m0_e0 | het | 58.3333 | 41.1765 | 100.0000 | 96.3636 | 7 | 10 | 6 | 0 | 0 | ||
| ckim-isaac | INDEL | I6_15 | map_l100_m0_e0 | hetalt | 85.7143 | 75.0000 | 100.0000 | 80.9524 | 3 | 1 | 4 | 0 | 0 | ||
| ckim-isaac | INDEL | I6_15 | map_l100_m0_e0 | homalt | 28.5714 | 16.6667 | 100.0000 | 91.6667 | 2 | 10 | 2 | 0 | 0 | ||
| ckim-isaac | INDEL | I6_15 | map_l100_m1_e0 | hetalt | 70.5882 | 54.5455 | 100.0000 | 82.1918 | 12 | 10 | 13 | 0 | 0 | ||
| ckim-isaac | INDEL | I6_15 | map_l100_m1_e0 | homalt | 39.0244 | 24.2424 | 100.0000 | 90.0000 | 8 | 25 | 8 | 0 | 0 | ||
| ckim-isaac | INDEL | I6_15 | map_l100_m2_e0 | hetalt | 70.5882 | 54.5455 | 100.0000 | 84.1463 | 12 | 10 | 13 | 0 | 0 | ||
| ckim-isaac | INDEL | I6_15 | map_l100_m2_e0 | homalt | 39.0244 | 24.2424 | 100.0000 | 90.8046 | 8 | 25 | 8 | 0 | 0 | ||
| ckim-isaac | INDEL | I6_15 | map_l100_m2_e1 | hetalt | 70.5882 | 54.5455 | 100.0000 | 84.7059 | 12 | 10 | 13 | 0 | 0 | ||
| ckim-isaac | INDEL | I6_15 | map_l100_m2_e1 | homalt | 39.0244 | 24.2424 | 100.0000 | 90.9091 | 8 | 25 | 8 | 0 | 0 | ||
| ckim-isaac | INDEL | I6_15 | map_l125_m0_e0 | * | 50.0000 | 33.3333 | 100.0000 | 96.7949 | 5 | 10 | 5 | 0 | 0 | ||
| ckim-isaac | INDEL | I6_15 | map_l125_m0_e0 | het | 50.0000 | 33.3333 | 100.0000 | 98.4252 | 3 | 6 | 2 | 0 | 0 | ||
| ckim-isaac | INDEL | I6_15 | map_l125_m0_e0 | hetalt | 0.0000 | 0.0000 | 100.0000 | 92.8571 | 0 | 0 | 1 | 0 | 0 | ||
| ckim-isaac | INDEL | I6_15 | map_l125_m0_e0 | homalt | 50.0000 | 33.3333 | 100.0000 | 86.6667 | 2 | 4 | 2 | 0 | 0 | ||
| ckim-isaac | INDEL | I6_15 | map_l125_m1_e0 | * | 50.7042 | 33.9623 | 100.0000 | 94.6903 | 18 | 35 | 18 | 0 | 0 | ||
| ckim-isaac | INDEL | I6_15 | map_l125_m1_e0 | het | 46.1538 | 30.0000 | 100.0000 | 96.7611 | 9 | 21 | 8 | 0 | 0 | ||
| ckim-isaac | INDEL | I6_15 | map_l125_m1_e0 | hetalt | 85.7143 | 75.0000 | 100.0000 | 84.0909 | 6 | 2 | 7 | 0 | 0 | ||
| ckim-isaac | INDEL | I6_15 | map_l125_m1_e0 | homalt | 33.3333 | 20.0000 | 100.0000 | 93.7500 | 3 | 12 | 3 | 0 | 0 | ||
| ckim-isaac | INDEL | I6_15 | map_l125_m2_e0 | * | 50.7042 | 33.9623 | 100.0000 | 95.3368 | 18 | 35 | 18 | 0 | 0 | ||
| ckim-isaac | INDEL | I6_15 | map_l125_m2_e0 | het | 46.1538 | 30.0000 | 100.0000 | 97.0803 | 9 | 21 | 8 | 0 | 0 | ||
| ckim-isaac | INDEL | I6_15 | map_l125_m2_e0 | hetalt | 85.7143 | 75.0000 | 100.0000 | 87.5000 | 6 | 2 | 7 | 0 | 0 | ||
| ckim-isaac | INDEL | I6_15 | map_l125_m2_e0 | homalt | 33.3333 | 20.0000 | 100.0000 | 94.6429 | 3 | 12 | 3 | 0 | 0 | ||
| ckim-isaac | INDEL | I6_15 | map_l125_m2_e1 | * | 50.7042 | 33.9623 | 100.0000 | 95.4774 | 18 | 35 | 18 | 0 | 0 | ||
| ckim-isaac | INDEL | I6_15 | map_l125_m2_e1 | het | 46.1538 | 30.0000 | 100.0000 | 97.1326 | 9 | 21 | 8 | 0 | 0 | ||
| ckim-isaac | INDEL | I6_15 | map_l125_m2_e1 | hetalt | 85.7143 | 75.0000 | 100.0000 | 88.1356 | 6 | 2 | 7 | 0 | 0 | ||
| ckim-isaac | INDEL | I6_15 | map_l125_m2_e1 | homalt | 33.3333 | 20.0000 | 100.0000 | 95.0000 | 3 | 12 | 3 | 0 | 0 | ||
| ckim-isaac | INDEL | I6_15 | map_l150_m0_e0 | * | 54.5455 | 37.5000 | 100.0000 | 97.7612 | 3 | 5 | 3 | 0 | 0 | ||
| ckim-isaac | INDEL | I6_15 | map_l150_m0_e0 | het | 66.6667 | 50.0000 | 100.0000 | 98.1982 | 2 | 2 | 2 | 0 | 0 | ||