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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt

« 1 2 ... 1547 1548 1549 1550 1551 1552 1553 1554 1555 ... 1720 1721 » 77501-77550 / 86044 show all
ckim-vqsr	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	99.3197	98.6486	100.0000	84.5612	438	6	438	0	0
ckim-vqsr	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	93.3333	1	0	1	0	0
ckim-vqsr	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	99.6068	99.2167	100.0000	83.3552	380	3	380	0	0
ckim-vqsr	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	93.7500	2	0	2	0	0
ckim-vqsr	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	100.0000	100.0000	100.0000	92.7273	12	0	12	0	0
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_diTR_11to50	hetalt	100.0000	100.0000	100.0000	95.0000	1	0	1	0	0
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_diTR_11to50	homalt	99.8220	99.6445	100.0000	64.1135	1682	6	1682	0	0
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_diTR_51to200	*	96.7742	93.7500	100.0000	97.8754	15	1	15	0	0
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_diTR_51to200	het	94.7368	90.0000	100.0000	98.3051	9	1	9	0	0
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_diTR_51to200	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_diTR_51to200	homalt	100.0000	100.0000	100.0000	96.5517	6	0	6	0	0
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	100.0000	100.0000	100.0000	80.0000	2	0	2	0	0
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_homopolymer_gt10	*		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_homopolymer_gt10	het		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_homopolymer_gt10	homalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	100.0000	100.0000	100.0000	85.7143	1	0	1	0	0
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.5591	99.1221	100.0000	34.4828	3952	35	3952	0	0
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_quadTR_51to200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_quadTR_51to200	homalt	92.3077	85.7143	100.0000	93.1350	30	5	30	0	0
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_quadTR_gt200	*		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_quadTR_gt200	het		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_quadTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_quadTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_triTR_11to50	hetalt		0.0000		100.0000	0	1	0	0	0
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_triTR_51to200	*	100.0000	100.0000	100.0000	94.4828	8	0	8	0	0
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_triTR_51to200	het	100.0000	100.0000	100.0000	92.4051	6	0	6	0	0
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_triTR_51to200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_triTR_51to200	homalt	100.0000	100.0000	100.0000	96.9697	2	0	2	0	0
ckim-vqsr	SNP	ti	map_l100_m0_e0	hetalt	25.0000	14.2857	100.0000	97.2973	2	12	2	0	0
ckim-vqsr	SNP	ti	map_l100_m0_e0	homalt	46.9836	30.7049	100.0000	82.8803	2387	5387	2387	0	0
ckim-vqsr	SNP	ti	map_l100_m1_e0	hetalt	51.2821	34.4828	100.0000	93.5065	10	19	10	0	0
ckim-vqsr	SNP	ti	map_l100_m2_e0	hetalt	53.6585	36.6667	100.0000	93.6416	11	19	11	0	0
dgrover-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt	100.0000	100.0000	100.0000	99.1914	9	0	9	0	0
dgrover-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_gt10	homalt	100.0000	100.0000	100.0000	99.8107	6	0	6	0	0
dgrover-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_gt200	*		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_gt200	het		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	het	99.7862	99.5733	100.0000	46.7275	700	3	700	0	0
dgrover-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	hetalt	99.8285	99.6575	100.0000	18.5754	582	2	583	0	0
dgrover-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_51to200	hetalt	97.8947	95.8763	100.0000	24.3902	93	4	93	0	0
dgrover-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_51to200	homalt	100.0000	100.0000	100.0000	38.2353	21	0	21	0	0
dgrover-gatk	INDEL	D6_15	map_l100_m0_e0	homalt	95.6522	91.6667	100.0000	90.7950	22	2	22	0	0
dgrover-gatk	INDEL	D6_15	map_l100_m1_e0	homalt	97.6000	95.3125	100.0000	86.8534	61	3	61	0	0
dgrover-gatk	INDEL	D6_15	map_l100_m2_e0	homalt	97.6378	95.3846	100.0000	87.3727	62	3	62	0	0
dgrover-gatk	INDEL	D6_15	map_l100_m2_e1	homalt	97.7099	95.5224	100.0000	87.3016	64	3	64	0	0
dgrover-gatk	INDEL	D6_15	map_l125_m0_e0	*	97.8261	95.7447	100.0000	94.1634	45	2	45	0	0
dgrover-gatk	INDEL	D6_15	map_l125_m0_e0	het	98.2456	96.5517	100.0000	94.8052	28	1	28	0	0
dgrover-gatk	INDEL	D6_15	map_l125_m0_e0	hetalt	100.0000	100.0000	100.0000	90.4762	6	0	6	0	0

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