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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt

« 1 2 ... 1542 1543 1544 1545 1546 1547 1548 1549 1550 ... 1720 1721 » 77251-77300 / 86044 show all
ckim-vqsr	INDEL	I1_5	map_l150_m2_e0	hetalt	100.0000	100.0000	100.0000	95.8140	9	0	9	0	0
ckim-vqsr	INDEL	I1_5	map_l150_m2_e1	hetalt	100.0000	100.0000	100.0000	95.4545	10	0	10	0	0
ckim-vqsr	INDEL	I1_5	map_l250_m0_e0	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I1_5	map_l250_m1_e0	hetalt	100.0000	100.0000	100.0000	97.8947	2	0	2	0	0
ckim-vqsr	INDEL	I1_5	map_l250_m2_e0	hetalt	100.0000	100.0000	100.0000	98.3051	2	0	2	0	0
ckim-vqsr	INDEL	I1_5	map_l250_m2_e1	hetalt	100.0000	100.0000	100.0000	98.3333	2	0	2	0	0
ckim-vqsr	INDEL	I1_5	map_siren	hetalt	95.3271	91.0714	100.0000	86.8047	102	10	102	0	0
ckim-vqsr	INDEL	I1_5	segdup	hetalt	96.7742	93.7500	100.0000	95.8106	45	3	46	0	0
ckim-vqsr	INDEL	I1_5	segdupwithalt	*		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I1_5	segdupwithalt	het		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I1_5	segdupwithalt	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I1_5	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I1_5	tech_badpromoters	*	100.0000	100.0000	100.0000	54.1667	22	0	22	0	0
ckim-vqsr	INDEL	I1_5	tech_badpromoters	het	100.0000	100.0000	100.0000	46.6667	8	0	8	0	0
ckim-vqsr	INDEL	I1_5	tech_badpromoters	hetalt	100.0000	100.0000	100.0000	50.0000	1	0	1	0	0
ckim-vqsr	INDEL	I1_5	tech_badpromoters	homalt	100.0000	100.0000	100.0000	58.0645	13	0	13	0	0
ckim-vqsr	INDEL	I6_15	HG002complexvar	hetalt	95.4701	91.3328	100.0000	52.5604	1117	106	1158	0	0
ckim-vqsr	INDEL	I6_15	decoy	*		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I6_15	decoy	het		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I6_15	decoy	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I6_15	decoy	homalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I6_15	func_cds	het	100.0000	100.0000	100.0000	44.1860	24	0	24	0	0
ckim-vqsr	INDEL	I6_15	func_cds	hetalt	85.7143	75.0000	100.0000	0.0000	3	1	3	0	0
ckim-vqsr	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	98.1132	96.2963	100.0000	78.8043	78	3	78	0	0
ckim-vqsr	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	88.0734	78.6885	100.0000	52.4752	48	13	48	0	0
ckim-vqsr	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.4318	98.8701	100.0000	74.3402	175	2	175	0	0
ckim-vqsr	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	97.5904	95.2941	100.0000	52.8736	81	4	82	0	0
ckim-vqsr	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.5851	99.1736	100.0000	69.2994	240	2	241	0	0
ckim-vqsr	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	100.0000	100.0000	100.0000	72.3982	122	0	122	0	0
ckim-vqsr	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	98.0392	96.1538	100.0000	54.0541	50	2	51	0	0
ckim-vqsr	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	70.6897	68	0	68	0	0
ckim-vqsr	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_51to200	homalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	*	98.6928	97.4194	100.0000	82.8829	151	4	152	0	0
ckim-vqsr	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.1870	98.3871	100.0000	86.8365	61	1	62	0	0
ckim-vqsr	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	96.4706	93.1818	100.0000	72.8477	41	3	41	0	0
ckim-vqsr	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	100.0000	100.0000	100.0000	81.5789	49	0	49	0	0
ckim-vqsr	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_gt10	*	100.0000	100.0000	100.0000	99.8656	2	0	2	0	0
ckim-vqsr	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_gt10	het		0.0000		100.0000	0	0	0	0	0

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