PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
76551-76600 / 86044 show all
egarrison-hhgaSNP*lowcmp_SimpleRepeat_triTR_51to200*
80.0000
66.6667
100.0000
95.9459
63600
egarrison-hhgaSNP*lowcmp_SimpleRepeat_triTR_51to200het
83.3333
71.4286
100.0000
95.6140
52500
egarrison-hhgaSNP*lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
egarrison-hhgaSNP*lowcmp_SimpleRepeat_triTR_51to200homalt
66.6667
50.0000
100.0000
97.0588
11100
egarrison-hhgaSNP*lowcmp_SimpleRepeat_triTR_gt200*
0.0000
100.0000
00000
egarrison-hhgaSNP*lowcmp_SimpleRepeat_triTR_gt200het
0.0000
100.0000
00000
egarrison-hhgaSNP*lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
egarrison-hhgaSNP*lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
100.0000
00000
egarrison-hhgaSNP*map_l125_m0_e0hetalt
87.5000
77.7778
100.0000
88.1356
72700
egarrison-hhgaSNP*map_l125_m1_e0hetalt
96.5517
93.3333
100.0000
78.2946
2822800
egarrison-hhgaSNP*map_l125_m2_e0hetalt
96.5517
93.3333
100.0000
81.3333
2822800
egarrison-hhgaSNP*map_l125_m2_e1hetalt
96.5517
93.3333
100.0000
81.4570
2822800
egarrison-hhgaSNP*map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
93.8776
30300
egarrison-hhgaSNP*map_l150_m1_e0hetalt
94.7368
90.0000
100.0000
82.0000
1821800
egarrison-hhgaSNP*map_l150_m2_e0hetalt
94.7368
90.0000
100.0000
84.6154
1821800
egarrison-hhgaSNP*map_l150_m2_e1hetalt
94.7368
90.0000
100.0000
84.8739
1821800
egarrison-hhgaSNP*map_l250_m0_e0hetalt
0.0000
100.0000
00000
egarrison-hhgaSNP*map_l250_m1_e0hetalt
66.6667
50.0000
100.0000
95.9184
22200
egarrison-hhgaSNP*map_l250_m2_e0hetalt
75.0000
60.0000
100.0000
95.0820
32300
egarrison-hhgaSNP*map_l250_m2_e1hetalt
75.0000
60.0000
100.0000
95.0820
32300
egarrison-hhgaSNP*segduphetalt
100.0000
100.0000
100.0000
97.8528
70700
egarrison-hhgaSNP*segdupwithalt*
0.0000
100.0000
00000
egarrison-hhgaSNP*segdupwithalthet
0.0000
100.0000
00000
egarrison-hhgaSNP*segdupwithalthetalt
0.0000
100.0000
00000
egarrison-hhgaSNP*segdupwithalthomalt
0.0000
100.0000
00000
egarrison-hhgaSNP*tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
egarrison-hhgaSNP*tech_badpromotershomalt
100.0000
100.0000
100.0000
50.6173
8008000
egarrison-hhgaSNPtiHG002compoundhethetalt
99.5663
99.1364
100.0000
22.9530
574557400
egarrison-hhgaSNPtidecoy*
0.0000
100.0000
00000
egarrison-hhgaSNPtidecoyhet
0.0000
100.0000
00000
egarrison-hhgaSNPtidecoyhetalt
0.0000
100.0000
00000
egarrison-hhgaSNPtidecoyhomalt
0.0000
100.0000
00000
egarrison-hhgaSNPtifunc_cdshetalt
100.0000
100.0000
100.0000
52.9412
80800
egarrison-hhgaSNPtifunc_cdshomalt
99.9810
99.9621
100.0000
20.9919
52732527300
egarrison-hhgaSNPtilowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
egarrison-hhgaSNPtilowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
egarrison-hhgaSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
egarrison-hhgaSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
egarrison-hhgaSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
egarrison-hhgaSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
100.0000
100.0000
100.0000
91.4894
1201200
egarrison-hhgaSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
egarrison-hhgaSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
egarrison-hhgaSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
egarrison-hhgaSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
egarrison-hhgaSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
egarrison-hhgaSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
83.3333
10100
egarrison-hhgaSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
66.6667
10100
egarrison-hhgaSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
egarrison-hhgaSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
egarrison-hhgaSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000