PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt

« 1 2 ... 1524 1525 1526 1527 1528 1529 1530 1531 1532 ... 1720 1721 » 76351-76400 / 86044 show all
egarrison-hhga	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_51to200	het	85.1064	74.0741	100.0000	88.3721	20	7	5	0	0
egarrison-hhga	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_51to200	homalt		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_gt200	*		0.0000	0.0000	0.0000	0	0	0	0	0
egarrison-hhga	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_gt200	het		0.0000	0.0000	0.0000	0	0	0	0	0
egarrison-hhga	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
egarrison-hhga	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
egarrison-hhga	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_gt10	*	100.0000	100.0000	100.0000	99.9916	1	0	1	0	0
egarrison-hhga	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_gt10	het		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt	100.0000	100.0000	100.0000	99.9816	1	0	1	0	0
egarrison-hhga	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_gt10	homalt		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_gt200	*		0.0000	0.0000	0.0000	0	0	0	0	0
egarrison-hhga	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_gt200	het		0.0000	0.0000	0.0000	0	0	0	0	0
egarrison-hhga	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
egarrison-hhga	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
egarrison-hhga	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_51to200	hetalt	93.0233	86.9565	100.0000	13.0435	20	3	20	0	0
egarrison-hhga	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_51to200	homalt		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_gt200	*		0.0000	0.0000	0.0000	0	0	0	0	0
egarrison-hhga	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_gt200	het		0.0000	0.0000	0.0000	0	0	0	0	0
egarrison-hhga	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
egarrison-hhga	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
egarrison-hhga	INDEL	I1_5	map_l100_m0_e0	hetalt	100.0000	100.0000	100.0000	94.6429	9	0	9	0	0
egarrison-hhga	INDEL	I1_5	map_l100_m1_e0	hetalt	98.8506	97.7273	100.0000	89.5631	43	1	43	0	0
egarrison-hhga	INDEL	I1_5	map_l100_m2_e0	hetalt	98.8506	97.7273	100.0000	90.5286	43	1	43	0	0
egarrison-hhga	INDEL	I1_5	map_l125_m0_e0	hetalt	100.0000	100.0000	100.0000	96.6102	4	0	4	0	0
egarrison-hhga	INDEL	I1_5	map_l125_m1_e0	hetalt	100.0000	100.0000	100.0000	93.8406	17	0	17	0	0
egarrison-hhga	INDEL	I1_5	map_l125_m2_e0	hetalt	100.0000	100.0000	100.0000	94.0994	19	0	19	0	0
egarrison-hhga	INDEL	I1_5	map_l125_m2_e1	hetalt	100.0000	100.0000	100.0000	94.2249	19	0	19	0	0
egarrison-hhga	INDEL	I1_5	map_l150_m0_e0	hetalt	100.0000	100.0000	100.0000	96.7742	3	0	3	0	0
egarrison-hhga	INDEL	I1_5	map_l150_m1_e0	hetalt	100.0000	100.0000	100.0000	95.7346	9	0	9	0	0
egarrison-hhga	INDEL	I1_5	map_l150_m2_e0	hetalt	100.0000	100.0000	100.0000	96.3710	9	0	9	0	0
egarrison-hhga	INDEL	I1_5	map_l150_m2_e1	hetalt	100.0000	100.0000	100.0000	96.0938	10	0	10	0	0
egarrison-hhga	INDEL	I1_5	map_l250_m0_e0	hetalt		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	INDEL	I1_5	map_l250_m0_e0	homalt	100.0000	100.0000	100.0000	97.2810	9	0	9	0	0
egarrison-hhga	INDEL	I1_5	map_l250_m1_e0	hetalt	100.0000	100.0000	100.0000	98.3051	2	0	2	0	0
egarrison-hhga	INDEL	I1_5	map_l250_m2_e0	hetalt	100.0000	100.0000	100.0000	98.6667	2	0	2	0	0
egarrison-hhga	INDEL	I1_5	map_l250_m2_e1	hetalt	100.0000	100.0000	100.0000	98.6842	2	0	2	0	0
egarrison-hhga	INDEL	I1_5	map_siren	hetalt	97.7169	95.5357	100.0000	88.2029	107	5	107	0	0
egarrison-hhga	INDEL	I1_5	segdupwithalt	*		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	INDEL	I1_5	segdupwithalt	het		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	INDEL	I1_5	segdupwithalt	hetalt		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	INDEL	I1_5	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	INDEL	I1_5	tech_badpromoters	*	100.0000	100.0000	100.0000	57.6923	22	0	22	0	0
egarrison-hhga	INDEL	I1_5	tech_badpromoters	het	100.0000	100.0000	100.0000	46.6667	8	0	8	0	0
egarrison-hhga	INDEL	I1_5	tech_badpromoters	hetalt	100.0000	100.0000	100.0000	50.0000	1	0	1	0	0
egarrison-hhga	INDEL	I1_5	tech_badpromoters	homalt	100.0000	100.0000	100.0000	62.8571	13	0	13	0	0
egarrison-hhga	INDEL	I6_15	decoy	*		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	INDEL	I6_15	decoy	het		0.0000		100.0000	0	0	0	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge