PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
73601-73650 / 86044 show all
gduggal-bwavardINDELI1_5lowcmp_SimpleRepeat_triTR_gt200*
0.0000
100.0000
00000
gduggal-bwavardINDELI1_5lowcmp_SimpleRepeat_triTR_gt200het
0.0000
100.0000
00000
gduggal-bwavardINDELI1_5lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELI1_5lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELI1_5map_l100_m0_e0hetalt
0.0000
0.0000
0.0000
09000
gduggal-bwavardINDELI1_5map_l100_m1_e0hetalt
0.0000
0.0000
0.0000
044000
gduggal-bwavardINDELI1_5map_l100_m2_e0hetalt
0.0000
0.0000
0.0000
044000
gduggal-bwavardINDELI1_5map_l100_m2_e1hetalt
0.0000
0.0000
0.0000
045000
gduggal-bwavardINDELI1_5map_l125_m0_e0hetalt
0.0000
0.0000
0.0000
04000
gduggal-bwavardINDELI1_5map_l125_m1_e0hetalt
0.0000
0.0000
0.0000
017000
gduggal-bwavardINDELI1_5map_l125_m2_e0hetalt
0.0000
0.0000
0.0000
019000
gduggal-bwavardINDELI1_5map_l125_m2_e1hetalt
0.0000
0.0000
0.0000
019000
gduggal-bwavardINDELI1_5map_l150_m0_e0hetalt
0.0000
0.0000
0.0000
03000
gduggal-bwavardINDELI1_5map_l150_m1_e0hetalt
0.0000
0.0000
0.0000
09000
gduggal-bwavardINDELI1_5map_l150_m2_e0hetalt
0.0000
0.0000
0.0000
09000
gduggal-bwavardINDELI1_5map_l150_m2_e1hetalt
0.0000
0.0000
0.0000
010000
gduggal-bwavardINDELI1_5map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELI1_5map_l250_m0_e0homalt
100.0000
100.0000
100.0000
96.1039
90900
gduggal-bwavardINDELI1_5map_l250_m1_e0hetalt
0.0000
0.0000
0.0000
02000
gduggal-bwavardINDELI1_5map_l250_m2_e0hetalt
0.0000
0.0000
0.0000
02000
gduggal-bwavardINDELI1_5map_l250_m2_e1hetalt
0.0000
0.0000
0.0000
02000
gduggal-bwavardINDELI1_5map_sirenhetalt
0.0000
0.8929
0.0000
0.0000
1111000
gduggal-bwavardINDELI1_5segduphetalt
0.0000
0.0000
0.0000
048000
gduggal-bwavardINDELI1_5segdupwithalt*
0.0000
100.0000
00000
gduggal-bwavardINDELI1_5segdupwithalthet
0.0000
100.0000
00000
gduggal-bwavardINDELI1_5segdupwithalthetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELI1_5segdupwithalthomalt
0.0000
100.0000
00000
gduggal-bwavardINDELI1_5tech_badpromotershetalt
0.0000
0.0000
0.0000
01000
gduggal-bwavardINDELI1_5tech_badpromotershomalt
81.8182
69.2308
100.0000
43.7500
94900
gduggal-bwavardINDELI6_15*hetalt
0.0000
0.1520
0.0000
0.0000
138538000
gduggal-bwavardINDELI6_15HG002complexvarhetalt
0.0000
1.0630
0.0000
0.0000
131210000
gduggal-bwavardINDELI6_15HG002compoundhethetalt
0.0000
0.1406
0.0000
0.0000
128525000
gduggal-bwavardINDELI6_15decoy*
0.0000
100.0000
00000
gduggal-bwavardINDELI6_15decoyhet
0.0000
100.0000
00000
gduggal-bwavardINDELI6_15decoyhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELI6_15decoyhomalt
0.0000
100.0000
00000
gduggal-bwavardINDELI6_15func_cdshetalt
0.0000
0.0000
0.0000
04000
gduggal-bwavardINDELI6_15func_cdshomalt
88.8889
80.0000
100.0000
7.1429
1231300
gduggal-bwavardINDELI6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.1887
0.0000
0.0000
1529000
gduggal-bwavardINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
gduggal-bwavardINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-bwavardINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-bwavardINDELI6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.2564
0.0000
0.0000
83112000
gduggal-bwavardINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.3403
0.0000
0.0000
123514000
gduggal-bwavardINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
061000
gduggal-bwavardINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
64.1509
47.2222
100.0000
59.5238
17191700
gduggal-bwavardINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
gduggal-bwavardINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-bwavardINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000