PrecisionFDA
Truth Challenge
Engage and improve DNA test results with our community challenges
Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
71251-71300 / 86044 show all | |||||||||||||||
| gduggal-bwaplat | INDEL | I16_PLUS | lowcmp_SimpleRepeat_triTR_51to200 | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-bwaplat | INDEL | I16_PLUS | lowcmp_SimpleRepeat_triTR_gt200 | * | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-bwaplat | INDEL | I16_PLUS | lowcmp_SimpleRepeat_triTR_gt200 | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-bwaplat | INDEL | I16_PLUS | lowcmp_SimpleRepeat_triTR_gt200 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-bwaplat | INDEL | I16_PLUS | lowcmp_SimpleRepeat_triTR_gt200 | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l100_m0_e0 | * | 16.6667 | 9.0909 | 100.0000 | 98.6301 | 1 | 10 | 1 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l100_m0_e0 | het | 22.2222 | 12.5000 | 100.0000 | 98.1132 | 1 | 7 | 1 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l100_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 1 | 0 | 0 | 0 | ||||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l100_m0_e0 | homalt | 0.0000 | 100.0000 | 0 | 2 | 0 | 0 | 0 | ||||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l100_m1_e0 | * | 32.2581 | 19.2308 | 100.0000 | 96.2406 | 5 | 21 | 5 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l100_m1_e0 | het | 28.5714 | 16.6667 | 100.0000 | 97.0297 | 3 | 15 | 3 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l100_m1_e0 | hetalt | 50.0000 | 33.3333 | 100.0000 | 90.0000 | 1 | 2 | 1 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l100_m1_e0 | homalt | 33.3333 | 20.0000 | 100.0000 | 95.4545 | 1 | 4 | 1 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l100_m2_e0 | * | 32.2581 | 19.2308 | 100.0000 | 96.7949 | 5 | 21 | 5 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l100_m2_e0 | het | 28.5714 | 16.6667 | 100.0000 | 97.3684 | 3 | 15 | 3 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l100_m2_e0 | hetalt | 50.0000 | 33.3333 | 100.0000 | 91.6667 | 1 | 2 | 1 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l100_m2_e0 | homalt | 33.3333 | 20.0000 | 100.0000 | 96.6667 | 1 | 4 | 1 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l100_m2_e1 | * | 32.2581 | 19.2308 | 100.0000 | 96.8354 | 5 | 21 | 5 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l100_m2_e1 | het | 28.5714 | 16.6667 | 100.0000 | 97.3684 | 3 | 15 | 3 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l100_m2_e1 | hetalt | 50.0000 | 33.3333 | 100.0000 | 92.3077 | 1 | 2 | 1 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l100_m2_e1 | homalt | 33.3333 | 20.0000 | 100.0000 | 96.7742 | 1 | 4 | 1 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l125_m0_e0 | * | 0.0000 | 100.0000 | 0 | 6 | 0 | 0 | 0 | ||||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l125_m0_e0 | het | 0.0000 | 100.0000 | 0 | 3 | 0 | 0 | 0 | ||||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l125_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 1 | 0 | 0 | 0 | ||||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l125_m0_e0 | homalt | 0.0000 | 100.0000 | 0 | 2 | 0 | 0 | 0 | ||||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l125_m1_e0 | * | 33.3333 | 20.0000 | 100.0000 | 97.3214 | 3 | 12 | 3 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l125_m1_e0 | het | 20.0000 | 11.1111 | 100.0000 | 98.8372 | 1 | 8 | 1 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l125_m1_e0 | hetalt | 50.0000 | 33.3333 | 100.0000 | 85.7143 | 1 | 2 | 1 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l125_m1_e0 | homalt | 50.0000 | 33.3333 | 100.0000 | 94.7368 | 1 | 2 | 1 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l125_m2_e0 | * | 33.3333 | 20.0000 | 100.0000 | 97.5610 | 3 | 12 | 3 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l125_m2_e0 | het | 20.0000 | 11.1111 | 100.0000 | 98.9011 | 1 | 8 | 1 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l125_m2_e0 | hetalt | 50.0000 | 33.3333 | 100.0000 | 87.5000 | 1 | 2 | 1 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l125_m2_e0 | homalt | 50.0000 | 33.3333 | 100.0000 | 95.8333 | 1 | 2 | 1 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l125_m2_e1 | * | 33.3333 | 20.0000 | 100.0000 | 97.5806 | 3 | 12 | 3 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l125_m2_e1 | het | 20.0000 | 11.1111 | 100.0000 | 98.9011 | 1 | 8 | 1 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l125_m2_e1 | hetalt | 50.0000 | 33.3333 | 100.0000 | 87.5000 | 1 | 2 | 1 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l125_m2_e1 | homalt | 50.0000 | 33.3333 | 100.0000 | 96.0000 | 1 | 2 | 1 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l150_m0_e0 | * | 0.0000 | 100.0000 | 0 | 4 | 0 | 0 | 0 | ||||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l150_m0_e0 | het | 0.0000 | 100.0000 | 0 | 2 | 0 | 0 | 0 | ||||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l150_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 1 | 0 | 0 | 0 | ||||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l150_m0_e0 | homalt | 0.0000 | 100.0000 | 0 | 1 | 0 | 0 | 0 | ||||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l150_m1_e0 | * | 30.7692 | 18.1818 | 100.0000 | 97.8947 | 2 | 9 | 2 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l150_m1_e0 | het | 28.5714 | 16.6667 | 100.0000 | 98.6667 | 1 | 5 | 1 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l150_m1_e0 | hetalt | 0.0000 | 100.0000 | 0 | 2 | 0 | 0 | 0 | ||||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l150_m1_e0 | homalt | 50.0000 | 33.3333 | 100.0000 | 93.7500 | 1 | 2 | 1 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l150_m2_e0 | * | 30.7692 | 18.1818 | 100.0000 | 98.0198 | 2 | 9 | 2 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l150_m2_e0 | het | 28.5714 | 16.6667 | 100.0000 | 98.7342 | 1 | 5 | 1 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l150_m2_e0 | hetalt | 0.0000 | 100.0000 | 0 | 2 | 0 | 0 | 0 | ||||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l150_m2_e0 | homalt | 50.0000 | 33.3333 | 100.0000 | 94.4444 | 1 | 2 | 1 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I16_PLUS | map_l150_m2_e1 | * | 30.7692 | 18.1818 | 100.0000 | 98.0198 | 2 | 9 | 2 | 0 | 0 | ||