PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
70001-70050 / 86044 show all
ltrigg-rtg1INDELI6_15map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
95.8904
30300
ltrigg-rtg1INDELI6_15map_l150_m2_e0homalt
100.0000
100.0000
100.0000
92.7835
70700
ltrigg-rtg1INDELI6_15map_l150_m2_e1hetalt
100.0000
100.0000
100.0000
96.0000
30300
ltrigg-rtg1INDELI6_15map_l150_m2_e1homalt
100.0000
100.0000
100.0000
92.1569
80800
ltrigg-rtg1INDELI6_15map_l250_m0_e0*
100.0000
100.0000
100.0000
98.1132
10100
ltrigg-rtg1INDELI6_15map_l250_m0_e0het
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15map_l250_m0_e0hetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15map_l250_m0_e0homalt
100.0000
100.0000
100.0000
95.0000
10100
ltrigg-rtg1INDELI6_15map_l250_m1_e0*
83.3333
71.4286
100.0000
96.1240
52500
ltrigg-rtg1INDELI6_15map_l250_m1_e0het
66.6667
50.0000
100.0000
95.8333
22200
ltrigg-rtg1INDELI6_15map_l250_m1_e0hetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15map_l250_m1_e0homalt
100.0000
100.0000
100.0000
93.1818
30300
ltrigg-rtg1INDELI6_15map_l250_m2_e0*
85.7143
75.0000
100.0000
95.8042
62600
ltrigg-rtg1INDELI6_15map_l250_m2_e0het
75.0000
60.0000
100.0000
94.4444
32300
ltrigg-rtg1INDELI6_15map_l250_m2_e0hetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15map_l250_m2_e0homalt
100.0000
100.0000
100.0000
93.8776
30300
ltrigg-rtg1INDELI6_15map_l250_m2_e1*
85.7143
75.0000
100.0000
95.9732
62600
ltrigg-rtg1INDELI6_15map_l250_m2_e1het
75.0000
60.0000
100.0000
94.5455
32300
ltrigg-rtg1INDELI6_15map_l250_m2_e1hetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15map_l250_m2_e1homalt
100.0000
100.0000
100.0000
94.1176
30300
ltrigg-rtg1INDELI6_15map_sirenhetalt
94.1176
88.8889
100.0000
80.5970
6486500
ltrigg-rtg1INDELI6_15segduphetalt
98.8764
97.7778
100.0000
91.0788
4414300
ltrigg-rtg1INDELI6_15segduphomalt
97.8261
95.7447
100.0000
89.8649
4524500
ltrigg-rtg1INDELI6_15segdupwithalt*
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15segdupwithalthet
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15segdupwithalthetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15segdupwithalthomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15tech_badpromoters*
100.0000
100.0000
100.0000
56.6667
1301300
ltrigg-rtg1INDELI6_15tech_badpromotershet
100.0000
100.0000
100.0000
58.8235
70700
ltrigg-rtg1INDELI6_15tech_badpromotershetalt
100.0000
100.0000
100.0000
40.0000
30300
ltrigg-rtg1INDELI6_15tech_badpromotershomalt
100.0000
100.0000
100.0000
62.5000
30300
ltrigg-rtg1SNP*HG002compoundhethetalt
99.8257
99.6520
100.0000
21.3175
859386000
ltrigg-rtg1SNP*decoy*
0.0000
100.0000
00000
ltrigg-rtg1SNP*decoyhet
0.0000
100.0000
00000
ltrigg-rtg1SNP*decoyhetalt
0.0000
100.0000
00000
ltrigg-rtg1SNP*decoyhomalt
0.0000
100.0000
00000
ltrigg-rtg1SNP*func_cdshetalt
100.0000
100.0000
100.0000
58.3333
1001000
ltrigg-rtg1SNP*func_cdshomalt
99.9857
99.9713
100.0000
22.0795
69772697700
ltrigg-rtg1SNP*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
100.0000
92.3077
00100
ltrigg-rtg1SNP*lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ltrigg-rtg1SNP*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ltrigg-rtg1SNP*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg1SNP*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ltrigg-rtg1SNP*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
96.0000
92.3077
100.0000
77.1930
1211300
ltrigg-rtg1SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg1SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
99.7820
99.5649
100.0000
51.8715
16027163300
ltrigg-rtg1SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ltrigg-rtg1SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ltrigg-rtg1SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg1SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000