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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt

« 1 2 ... 1371 1372 1373 1374 1375 1376 1377 1378 1379 ... 1720 1721 » 68701-68750 / 86044 show all
jmaeng-gatk	INDEL	I1_5	segdupwithalt	het		0.0000		100.0000	0	0	0	0	0
jmaeng-gatk	INDEL	I1_5	segdupwithalt	hetalt		0.0000		100.0000	0	0	0	0	0
jmaeng-gatk	INDEL	I1_5	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
jmaeng-gatk	INDEL	I1_5	tech_badpromoters	*	100.0000	100.0000	100.0000	53.1915	22	0	22	0	0
jmaeng-gatk	INDEL	I1_5	tech_badpromoters	het	100.0000	100.0000	100.0000	42.8571	8	0	8	0	0
jmaeng-gatk	INDEL	I1_5	tech_badpromoters	hetalt	100.0000	100.0000	100.0000	50.0000	1	0	1	0	0
jmaeng-gatk	INDEL	I1_5	tech_badpromoters	homalt	100.0000	100.0000	100.0000	58.0645	13	0	13	0	0
jmaeng-gatk	INDEL	I6_15	HG002complexvar	hetalt	95.0665	90.5969	100.0000	53.0086	1108	115	1148	0	0
jmaeng-gatk	INDEL	I6_15	HG002compoundhet	hetalt	95.7568	91.8590	100.0000	28.4755	7842	695	7882	0	0
jmaeng-gatk	INDEL	I6_15	decoy	*		0.0000		100.0000	0	0	0	0	0
jmaeng-gatk	INDEL	I6_15	decoy	het		0.0000		100.0000	0	0	0	0	0
jmaeng-gatk	INDEL	I6_15	decoy	hetalt		0.0000		100.0000	0	0	0	0	0
jmaeng-gatk	INDEL	I6_15	decoy	homalt		0.0000		100.0000	0	0	0	0	0
jmaeng-gatk	INDEL	I6_15	func_cds	hetalt	85.7143	75.0000	100.0000	0.0000	3	1	3	0	0
jmaeng-gatk	INDEL	I6_15	func_cds	homalt	100.0000	100.0000	100.0000	42.3077	15	0	15	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	92.8210	86.6038	100.0000	44.7917	459	71	477	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	89.0909	80.3279	100.0000	51.0000	49	12	49	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.1453	98.3051	100.0000	74.5985	174	3	174	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	96.3415	92.9412	100.0000	54.5455	79	6	80	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	98.9562	97.9339	100.0000	69.3299	237	5	238	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	99.5885	99.1803	100.0000	71.9258	121	1	121	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	96.0000	92.3077	100.0000	56.2500	48	4	49	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	70.8155	68	0	68	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	93.0781	87.0523	100.0000	43.3735	316	47	329	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_51to200	*	82.0513	69.5652	100.0000	59.4937	64	28	64	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_51to200	het		77.7778		100.0000	7	2	0	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_51to200	hetalt	81.4286	68.6747	100.0000	27.2727	57	26	64	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_51to200	homalt		0.0000		100.0000	0	0	0	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_gt200	*		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_gt200	het		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.1870	98.3871	100.0000	86.9198	61	1	62	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	100.0000	100.0000	100.0000	81.5094	49	0	49	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_gt10	*	100.0000	100.0000	100.0000	99.8691	2	0	2	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_gt10	het		0.0000		100.0000	0	0	0	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt	100.0000	100.0000	100.0000	99.3691	2	0	2	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_gt10	homalt		0.0000		100.0000	0	0	0	0	0

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