PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt

« 1 2 ... 1113 1114 1115 1116 1117 1118 1119 1120 1121 ... 1720 1721 » 55801-55850 / 86044 show all
asubramanian-gatk	INDEL	C6_15	map_l100_m2_e1	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	map_l100_m2_e1	homalt		0.0000		100.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	map_l125_m0_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	map_l125_m0_e0	homalt		0.0000		100.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	map_l125_m1_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	map_l125_m1_e0	homalt		0.0000		100.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	map_l125_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	map_l125_m2_e0	homalt		0.0000		100.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	map_l125_m2_e1	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	map_l125_m2_e1	homalt		0.0000		100.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	map_l150_m0_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	map_l150_m0_e0	homalt		0.0000		100.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	map_l150_m1_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	map_l150_m1_e0	homalt		0.0000		100.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	map_l150_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	map_l150_m2_e0	homalt		0.0000		100.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	map_l150_m2_e1	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	map_l150_m2_e1	homalt		0.0000		100.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	map_l250_m0_e0	*		0.0000		100.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	map_l250_m0_e0	het		0.0000		100.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	map_l250_m0_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	map_l250_m0_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	map_l250_m1_e0	*		0.0000		100.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	map_l250_m1_e0	het		0.0000		100.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	map_l250_m1_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	map_l250_m1_e0	homalt		0.0000		100.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	map_l250_m2_e0	*		0.0000		100.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	map_l250_m2_e0	het		0.0000		100.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	map_l250_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	map_l250_m2_e0	homalt		0.0000		100.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	map_l250_m2_e1	*		0.0000		100.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	map_l250_m2_e1	het		0.0000		100.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	map_l250_m2_e1	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	map_l250_m2_e1	homalt		0.0000		100.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	map_siren	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	map_siren	homalt		0.0000		100.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	segdup	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	segdup	homalt		0.0000		100.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	segdupwithalt	*		0.0000		100.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	segdupwithalt	het		0.0000		100.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	segdupwithalt	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	tech_badpromoters	*		0.0000		100.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	tech_badpromoters	het		0.0000	0.0000	0.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	tech_badpromoters	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C6_15	tech_badpromoters	homalt		0.0000		100.0000	0	0	0	0	0
asubramanian-gatk	INDEL	D16_PLUS	decoy	*	100.0000	100.0000	100.0000	99.4382	6	0	6	0	0
asubramanian-gatk	INDEL	D16_PLUS	decoy	het	100.0000	100.0000	100.0000	99.5056	4	0	4	0	0
asubramanian-gatk	INDEL	D16_PLUS	decoy	hetalt		0.0000		100.0000	0	0	0	0	0
asubramanian-gatk	INDEL	D16_PLUS	decoy	homalt	100.0000	100.0000	100.0000	99.1304	2	0	2	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge