PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt

« 1 2 ... 1064 1065 1066 1067 1068 1069 1070 1071 1072 ... 1720 1721 » 53351-53400 / 86044 show all
anovak-vg	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	0.0000	0.0000	100.0000	94.3396	0	0	3	0	0
anovak-vg	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	0.0000	0.0000	100.0000	92.7928	0	0	8	0	0
anovak-vg	INDEL	C1_5	lowcmp_SimpleRepeat_diTR_11to50	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	lowcmp_SimpleRepeat_diTR_51to200	*		0.0000		100.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	lowcmp_SimpleRepeat_diTR_51to200	het		0.0000		100.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	lowcmp_SimpleRepeat_diTR_51to200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	lowcmp_SimpleRepeat_diTR_51to200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	0.0000	0.0000	100.0000	98.6486	0	0	1	0	0
anovak-vg	INDEL	C1_5	lowcmp_SimpleRepeat_homopolymer_gt10	*		0.0000		100.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	lowcmp_SimpleRepeat_homopolymer_gt10	het		0.0000		100.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	lowcmp_SimpleRepeat_homopolymer_gt10	homalt		0.0000		100.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	lowcmp_SimpleRepeat_quadTR_11to50	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	lowcmp_SimpleRepeat_quadTR_11to50	homalt	0.0000	0.0000	100.0000	93.7500	0	0	1	0	0
anovak-vg	INDEL	C1_5	lowcmp_SimpleRepeat_quadTR_51to200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	lowcmp_SimpleRepeat_quadTR_51to200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	lowcmp_SimpleRepeat_quadTR_gt200	*		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	lowcmp_SimpleRepeat_quadTR_gt200	het		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	lowcmp_SimpleRepeat_quadTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	lowcmp_SimpleRepeat_quadTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	lowcmp_SimpleRepeat_triTR_11to50	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	lowcmp_SimpleRepeat_triTR_11to50	homalt	0.0000	0.0000	100.0000	92.8571	0	0	1	0	0
anovak-vg	INDEL	C1_5	lowcmp_SimpleRepeat_triTR_51to200	*		0.0000		100.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	lowcmp_SimpleRepeat_triTR_51to200	het		0.0000		100.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	lowcmp_SimpleRepeat_triTR_51to200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	lowcmp_SimpleRepeat_triTR_51to200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	lowcmp_SimpleRepeat_triTR_gt200	*		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	lowcmp_SimpleRepeat_triTR_gt200	het		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	lowcmp_SimpleRepeat_triTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	lowcmp_SimpleRepeat_triTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	map_l100_m0_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	map_l100_m0_e0	homalt		0.0000		100.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	map_l100_m1_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	map_l100_m1_e0	homalt	0.0000	0.0000	100.0000	96.9697	0	0	1	0	0
anovak-vg	INDEL	C1_5	map_l100_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	map_l100_m2_e0	homalt	0.0000	0.0000	100.0000	97.2222	0	0	1	0	0
anovak-vg	INDEL	C1_5	map_l100_m2_e1	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	map_l100_m2_e1	homalt	0.0000	0.0000	100.0000	97.2222	0	0	1	0	0
anovak-vg	INDEL	C1_5	map_l125_m0_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	map_l125_m0_e0	homalt		0.0000		100.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	map_l125_m1_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	map_l125_m1_e0	homalt	0.0000	0.0000	100.0000	96.1538	0	0	1	0	0
anovak-vg	INDEL	C1_5	map_l125_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	map_l125_m2_e0	homalt	0.0000	0.0000	100.0000	96.4286	0	0	1	0	0
anovak-vg	INDEL	C1_5	map_l125_m2_e1	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	map_l125_m2_e1	homalt	0.0000	0.0000	100.0000	96.4286	0	0	1	0	0
anovak-vg	INDEL	C1_5	map_l150_m0_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	map_l150_m0_e0	homalt		0.0000		100.0000	0	0	0	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge