PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
50151-50200 / 86044 show all
hfeng-pmm1INDELC6_15map_l250_m2_e0homalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELC6_15map_l250_m2_e1*
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELC6_15map_l250_m2_e1het
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELC6_15map_l250_m2_e1hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELC6_15map_l250_m2_e1homalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELC6_15map_siren*
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELC6_15map_sirenhet
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELC6_15map_sirenhetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELC6_15map_sirenhomalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELC6_15segdup*
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELC6_15segduphet
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELC6_15segduphetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELC6_15segduphomalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELC6_15segdupwithalt*
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELC6_15segdupwithalthet
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELC6_15segdupwithalthetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELC6_15segdupwithalthomalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELC6_15tech_badpromoters*
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELC6_15tech_badpromotershet
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELC6_15tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELC6_15tech_badpromotershomalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELD16_PLUSHG002compoundhethetalt
96.7327
93.6722
100.0000
26.4571
1806122191800
hfeng-pmm1INDELD16_PLUSdecoy*
100.0000
100.0000
100.0000
99.0338
60600
hfeng-pmm1INDELD16_PLUSdecoyhet
100.0000
100.0000
100.0000
99.1150
40400
hfeng-pmm1INDELD16_PLUSdecoyhetalt
0.0000
100.0000
00000
hfeng-pmm1INDELD16_PLUSdecoyhomalt
100.0000
100.0000
100.0000
98.5401
20200
hfeng-pmm1INDELD16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELD16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
60.0000
40400
hfeng-pmm1INDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
93.3333
10100
hfeng-pmm1INDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
98.1102
96.2906
100.0000
36.8910
124648136000
hfeng-pmm1INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
95.2381
90.9091
100.0000
83.1169
1011300
hfeng-pmm1INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
92.3077
10100
hfeng-pmm1INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
70.8861
1902300
hfeng-pmm1INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
48.1481
1201400
hfeng-pmm1INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
hfeng-pmm1INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
hfeng-pmm1INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
hfeng-pmm1INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
hfeng-pmm1INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
98.1661
96.3983
100.0000
32.3751
9103498800
hfeng-pmm1INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
99.7831
99.5671
100.0000
57.2491
460246000
hfeng-pmm1INDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50hetalt
98.3139
96.6837
100.0000
33.5714
7582683700
hfeng-pmm1INDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50homalt
99.6226
99.2481
100.0000
62.3932
396339600
hfeng-pmm1INDELD16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
91.8719
84.9658
100.0000
34.9929
3736645700
hfeng-pmm1INDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
56.7568
1201600
hfeng-pmm1INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
82.1705
2302300
hfeng-pmm1INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10*
91.2000
83.8235
100.0000
96.3344
57115700