PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
4851-4900 / 86044 show all
mlin-fermikitSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
80.0000
10100
mlin-fermikitSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
75.0000
10100
mlin-fermikitSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
mlin-fermikitSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
mlin-fermikitSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
mlin-fermikitSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
mlin-fermikitSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
84.6154
20200
mlin-fermikitSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
81.8182
20200
mlin-fermikitSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
91.4286
30300
mlin-fermikitSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
96.5517
93.3333
100.0000
85.5670
1411400
mlin-fermikitSNP*lowcmp_SimpleRepeat_diTR_11to50hetalt
100.0000
100.0000
100.0000
94.1176
10100
mlin-fermikitSNP*lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitSNP*lowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
68.7500
50500
mlin-fermikitSNP*lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
mlin-fermikitSNP*lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
mlin-fermikitSNP*lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
mlin-fermikitSNP*lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
mlin-fermikitSNP*lowcmp_SimpleRepeat_quadTR_11to50hetalt
100.0000
100.0000
100.0000
50.0000
50500
mlin-fermikitSNP*lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitSNP*lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
mlin-fermikitSNP*lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
mlin-fermikitSNP*lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitSNP*lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
mlin-fermikitSNP*lowcmp_SimpleRepeat_triTR_11to50hetalt
100.0000
100.0000
100.0000
66.6667
10100
mlin-fermikitSNP*lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitSNP*lowcmp_SimpleRepeat_triTR_51to200homalt
66.6667
50.0000
100.0000
99.1453
11100
mlin-fermikitSNP*map_l100_m0_e0hetalt
31.5789
18.7500
100.0000
80.0000
313300
mlin-fermikitSNP*map_l100_m1_e0hetalt
56.1404
39.0244
100.0000
68.6275
16251600
mlin-fermikitSNP*map_l100_m2_e0hetalt
57.6271
40.4762
100.0000
71.6667
17251700
mlin-fermikitSNP*map_l100_m2_e1hetalt
59.0164
41.8605
100.0000
70.9677
18251800
mlin-fermikitSNP*map_l125_m0_e0hetalt
0.0000
100.0000
09000
mlin-fermikitSNP*map_l125_m1_e0hetalt
46.1538
30.0000
100.0000
68.9655
921900
mlin-fermikitSNP*map_l125_m2_e0hetalt
46.1538
30.0000
100.0000
76.3158
921900
mlin-fermikitSNP*map_l125_m2_e1hetalt
46.1538
30.0000
100.0000
76.9231
921900
mlin-fermikitSNP*map_l150_m0_e0hetalt
0.0000
100.0000
03000
mlin-fermikitSNP*map_l150_m1_e0hetalt
46.1538
30.0000
100.0000
68.4211
614600
mlin-fermikitSNP*map_l150_m2_e0hetalt
46.1538
30.0000
100.0000
73.9130
614600
mlin-fermikitSNP*map_l150_m2_e1hetalt
46.1538
30.0000
100.0000
75.0000
614600
mlin-fermikitSNP*map_l250_m0_e0hetalt
0.0000
100.0000
00000
mlin-fermikitSNP*map_l250_m1_e0hetalt
0.0000
100.0000
04000
mlin-fermikitSNP*map_l250_m2_e0hetalt
0.0000
100.0000
05000
mlin-fermikitSNP*map_l250_m2_e1hetalt
0.0000
100.0000
05000
mlin-fermikitSNP*map_sirenhetalt
72.4409
56.7901
100.0000
65.9259
46354600
mlin-fermikitSNP*segduphetalt
100.0000
100.0000
100.0000
92.8571
70700
mlin-fermikitSNP*segdupwithalt*
0.0000
100.0000
00000
mlin-fermikitSNP*segdupwithalthet
0.0000
100.0000
00000
mlin-fermikitSNP*segdupwithalthetalt
0.0000
100.0000
00000
mlin-fermikitSNP*segdupwithalthomalt
0.0000
100.0000
00000
mlin-fermikitSNP*tech_badpromotershetalt
0.0000
0.0000
0.0000
00000